Round5 精度改善レポート(短い略語)

round4 の短い no_match 略語を対象に、fullname 既知+文献確認済みの選択的 abbrev / alias ルールを追加した結果です。比較: round4_abbrevround5_abbrev (判定は Flash×3 固定。エンジン v0.8.5)。

サマリー

no_match
187
r4 324 → -137 / baseline 663
aligned
1454
r4 1372 → +82 / baseline 1139
wrong
563
r4 584 → -21 / baseline 692
r4→r5 改善/悪化
179 / 2
baseline→r5: 692 / 44

全体ラベル(round4_abbrev → round5_abbrev)

labelround4_abbrevround5_abbrevΔ
aligned13721454+82
broader_parent898969+71
partial_or_narrower248256+8
wrong584563-21
ambiguous660
source_or_ontology_issue12120
no_consensus1411-3
no_match324187-137

abbrev のみ

labelround4_abbrevround5_abbrevΔ
aligned9401019+79
broader_parent537594+57
partial_or_narrower169180+11
wrong385378-7
ambiguous550
source_or_ontology_issue330
no_consensus129-3
no_match317180-137

Round5 で入れた変更

  1. 選択的 abbrev ルール — Thal/PreS/PeRh/vHipp/dcHPC/PH/SOA/SNpc/ARN/PaF など、fullname または文献で用法が明確な短い略語を追加(~130 件)。
  2. abbrev-only 文献確認 — PiCo→IRt、mZI→ZI、IntA→InPl、PPRF→pontine RF、DAO→IO など。
  3. alias 補強 — posterior hypothalamus→PHN、VLPO→LPA、SOA area→Su3、dorsal horn→spinal horn parent など展開後の解決を保証。
  4. やらないこと — CINs/PoSp/organoid/marker 融合などオントロジー外・細胞種のみはスキップ。曖昧な 2 文字 RF 等は未追加。

代表例(round4 → round5)

queryround4round5
Thalno_match
(no_match)
aligned
thalamus
PreSno_match
(no_match)
aligned
presubiculum (presubicular cortex)
PeRhno_match
(no_match)
partial_or_narrower
perirhinal cortex (area 35)
vHippno_match
(no_match)
broader_parent
hippocampus
dcHPCno_match
(no_match)
broader_parent
hippocampus
PHno_match
(no_match)
partial_or_narrower
posterior hypothalamic nucleus
SOAno_match
(no_match)
partial_or_narrower
supraoculomotor nucleus
SNpcno_match
(no_match)
aligned
substantia nigra, compact division
PiCono_match
(no_match)
broader_parent
intermediate reticular nucleus
mZIno_match
(no_match)
broader_parent
zona incerta
IntAno_match
(no_match)
aligned
lateral interpositus (emboliform) nucleus
PPRFno_match
(no_match)
broader_parent
Pontine reticular formation
DAOno_match
(no_match)
broader_parent
inferior olive
ARNno_match
(no_match)
aligned
arcuate nucleus of hypothalamus
PaFno_match
(no_match)
aligned
parafascicular nucleus of thalamus
VLPOno_match
(no_match)
broader_parent
lateral preoptic area
DHno_match
(no_match)
aligned
dorsal column (horn) of spinal cord
ADnno_match
(no_match)
aligned
anterodorsal nucleus of thalamus
HPno_match
(no_match)
aligned
hippocampus
MCPOno_match
(no_match)
broader_parent
lateral preoptic area
CPrno_match
(no_match)
broader_parent
dorsal striatum (caudoputamen complex-CP, STRd)
BNCno_match
(no_match)
aligned
basolateral nuclear group of amygdala
SGIno_match
(no_match)
aligned
intermediate gray layer of superior colliculus

改善例(179)

kindquerybeforeafter
abbrevdorsal hornpartial_or_narrower
dorsal horn of sacral spinal cord
aligned
dorsal column (horn) of spinal cord
abbrevPiCono_match
(no_match)
broader_parent
intermediate reticular nucleus
abbrevPHno_match
(no_match)
partial_or_narrower
posterior hypothalamic nucleus
abbrevPreSno_match
(no_match)
aligned
presubiculum (presubicular cortex)
abbrevThalno_match
(no_match)
aligned
thalamus
abbrevdcHPCno_match
(no_match)
broader_parent
hippocampus
abbrevSOAno_match
(no_match)
partial_or_narrower
supraoculomotor nucleus
abbrevvHippno_match
(no_match)
broader_parent
hippocampus
abbrevPeRhno_match
(no_match)
partial_or_narrower
perirhinal cortex (area 35)
abbrevSNpcno_match
(no_match)
aligned
substantia nigra, compact division
abbrevvHCno_match
(no_match)
broader_parent
hippocampus
abbrevADnno_match
(no_match)
aligned
anterodorsal nucleus of thalamus
fullnameanterior dorsal thalamuswrong
ventral anterior nucleus of thalamus
aligned
anterodorsal nucleus of thalamus
abbrevDHno_match
(no_match)
aligned
dorsal column (horn) of spinal cord
fullnamedorsal hornpartial_or_narrower
dorsal horn of sacral spinal cord
aligned
dorsal column (horn) of spinal cord
abbrevPaFno_match
(no_match)
aligned
parafascicular nucleus of thalamus
abbrevrILNno_match
(no_match)
broader_parent
intralaminar nuclear complex of thalamus
abbrevARNno_match
(no_match)
aligned
arcuate nucleus of hypothalamus
abbrevavTRNno_match
(no_match)
broader_parent
reticular nucleus of thalamus
abbrevDMno_match
(no_match)
partial_or_narrower
dorsomedial hypothalamic nucleus
abbrevHPno_match
(no_match)
aligned
hippocampus
abbrevVHno_match
(no_match)
broader_parent
hippocampus
abbrevvHIPno_match
(no_match)
broader_parent
hippocampus
abbrevVNCno_match
(no_match)
partial_or_narrower
vestibular nuclei in pons
fullnamevestibular nuclear complexwrong
intralaminar nuclear complex of thalamus
partial_or_narrower
vestibular nuclei in pons

悪化例(2)

kindquerybeforeafter
fullnamelamina II of the dorsal hornaligned
lamina II of spinal cord
broader_parent
dorsal column (horn) of spinal cord
fullnameinner lamina II of dorsal hornaligned
lamina II of spinal cord, inner part
broader_parent
dorsal column (horn) of spinal cord

baseline からの通算

no_match 663 → 187 (-476)、 aligned 1139 → 1454、 wrong 692 → 563。 useful ≈ aligned+broader: 1828 → 2423。