Projection corpus curation
ラベル監査(特に non_neocortex への新皮質混入)と、RCSテストデータ適性の精査。
ルール事前フラグ + DeepSeek v4-flash 3-pass(票割れのみ v4-pro)。
生成: 2026-08-01 15:21 UTC。
flash 3-pass + 票割れ pro 完了。未合意のみ事前ラベル保持(audit_stage=unresolved)。
Total
6935
API audited
673
rule-only 6262
Class corrected
244
label changed
Neo in non-neo
108
contamination fixed
Neo→non-neo
0
allo/meso flips
Suitable
3360
Suitable non-neo
2368
improvement-loop set
Suitable neo
992
Region class — before
| Label | N | % | |
|---|---|---|---|
| non_neocortex | 3523 | 50.8% | |
| other | 1688 | 24.3% | |
| neocortex | 1458 | 21.0% | |
| ambiguous | 261 | 3.8% | |
| unresolved | 5 | 0.1% |
Region class — after audit
| Label | N | % | |
|---|---|---|---|
| non_neocortex | 3398 | 49.0% | |
| other | 1771 | 25.5% | |
| neocortex | 1526 | 22.0% | |
| ambiguous | 240 | 3.5% |
Suitability
| Label | N | % | |
|---|---|---|---|
| unsuitable | 3575 | 51.6% | |
| suitable | 3360 | 48.4% |
Unsuitable reasons
| Reason | N | % | |
|---|---|---|---|
| cell_type_or_marker | 1331 | 37.2% | |
| other | 827 | 23.1% | |
| layer_only | 514 | 14.4% | |
| compound_multi_region | 440 | 12.3% | |
| fiber_tract_or_ventricle | 164 | 4.6% | |
| ambiguous_name | 145 | 4.1% | |
| acronym_unresolved | 74 | 2.1% | |
| too_broad | 67 | 1.9% | |
| not_anatomical | 13 | 0.4% |
API priority mix
| Priority | N | % | |
|---|---|---|---|
| flash_split | 256 | 38.0% | |
| weak_neocortex | 174 | 25.9% | |
| contamination_suspect | 127 | 18.9% | |
| spotcheck | 116 | 17.2% |
Contamination fixed — non_neocortex → neocortex
showing 100 / 108
| structure_name | fullname | n_mentions | region_class_before | region_class | suitability | unsuitable_reason | audit_stage | audit_reason |
|---|---|---|---|---|---|---|---|---|
| ACC | anterior cingulate cortex | 261 | non_neocortex | neocortex | suitable | flash | ACC is treated as isocortex in rodent atlases, so non_neocortex is incorrect. | ACC/anterior cingulate cortex is standard projection ROI; rodent atlases treat cingulate as isocortex-like neocortex. | ACC is anterior cingulate cortex, treated as isocortex in rodent atlases; non-neocortex label is incorrect. | |
| PCC | posterior cingulate cortex | 39 | non_neocortex | neocortex | suitable | flash | Posterior cingulate cortex is isocortex/limbic cortex; current non_neocortex is misclassified. | Posterior cingulate cortex is a cingulate/isocortex-like projection ROI, not clear allocortex. | PCC is posterior cingulate cortex, treated as isocortical projection ROI; non_neocortex is suspect. | |
| aIC | anterior insular cortex | 32 | non_neocortex | neocortex | suitable | flash | Anterior insular cortex is isocortex in rodent atlases; current non-neocortex is incorrect. | Anterior insular cortex is a standard cortical projection ROI; rodent insula is conventionally treated as isocortex-like. | Anterior insular cortex is insula; rodent atlases treat insula as neocortex, so non_neocortex is wrong. | |
| anterior cingulate cortex | anterior cingulate cortex | 26 | non_neocortex | neocortex | suitable | flash | ACC is treated as isocortex for standard projection ROIs; current non_neocortex mismatch. | ACC is a standard cingulate/cortical projection ROI, conventionally treated as neocortex/mesocortex for circuit mapping. | Anterior cingulate cortex is standard projection ROI treated as isocortex; should be neocortex. | |
| cingulate cortex | cingulate cortex | 23 | non_neocortex | neocortex | suitable | flash | Cingulate cortex corresponds to ACC/isocortex in rodent atlases; should be neocortex. | Cingulate cortex is a standard cortical projection ROI; in rodent atlases it is conventionally treated as isocortex/mesocortex, so neocortex. | Cingulate cortex is cortical; ACC/retrosplenial treated as isocortex in rodent atlases. | |
| pACC | posterior anterior cingulate cortex | 17 | non_neocortex | neocortex | suitable | flash | pACC is anterior cingulate cortex; ACC treated as isocortex, so neocortex; current non-neocortex mismatch. | Posterior anterior cingulate cortex is a cingulate cortical ROI; treat as neocortex per atlas pragmatism. | pACC is part of cingulate cortex; ACC is standard neocortex/projection ROI, so non_neocortex is wrong | |
| anterior insula | anterior insula | 16 | non_neocortex | neocortex | suitable | flash | Anterior insula is insular cortex; treated as isocortex, so neocortex; current non-neocortex mismatch. | Anterior insula is a standard insular cortical projection ROI; despite mesocortical features, treat as neocortex per guidance. | Anterior insula is insular cortex, a standard projection ROI treated as neocortex; current non_neocortex is wrong | |
| sgACC | subgenual anterior cingulate cortex | 16 | non_neocortex | neocortex | suitable | flash | Subgenual anterior cingulate cortex is ACC, treated as neocortex in standard atlases. | sgACC (subgenual anterior cingulate cortex) is a cingulate cortical ROI; treat as neocortex despite mesocortical specializations. | Cingulate/ACC projection ROI counts as neocortex; non_neocortex label is incorrect. | |
| pgACC | perigenual anterior cingulate cortex | 13 | non_neocortex | neocortex | suitable | flash | pgACC is anterior cingulate cortex, treated as neocortex in standard atlases. | pgACC (perigenual anterior cingulate cortex) is a standard cortical/PFC projection ROI; mesocortical ACC is conventionally treated as isocortex, so neocortex. | pgACC is perigenual anterior cingulate cortex; ACC treated as isocortex/neocortex. | |
| dACC | dorsal anterior cingulate cortex | 12 | non_neocortex | neocortex | suitable | flash | dACC is dorsal anterior cingulate cortex, treated as neocortex in standard atlases. | dACC (dorsal anterior cingulate cortex) is a standard cingulate cortical ROI and should be treated as neocortex, not non_neocortex. | dACC is dorsal anterior cingulate cortex; ACC treated as isocortex/neocortex. | |
| posterior cingulate cortex | posterior cingulate cortex | 12 | non_neocortex | neocortex | suitable | flash | Posterior cingulate cortex is cingulate/isocortex; current non_neocortex is wrong. | Posterior cingulate cortex is a standard cortical projection ROI; cingulate usages are preferentially treated as neocortex. | Posterior cingulate cortex is cingulate/isocortex, not non_neocortex. | |
| AIV | agranular insular cortex, ventral part | 11 | non_neocortex | neocortex | suitable | flash | AIV is agranular insular cortex; insula treated as isocortex, so neocortex not non_neocortex. | AIV is agranular insular cortex; insular cortical ROIs are conventionally treated as neocortex in rodent atlases, so current label is incorrect. | AIV/agranular insular cortex ventral is insula; insula treated as isocortex/neocortex. | |
| Cing | cingulate cortex | 11 | non_neocortex | neocortex | suitable | flash | Cingulate cortex is isocortex; should be neocortex, not non_neocortex. | Cingulate cortex is a standard cortical projection ROI; in rodent atlases cingulate/mesocortical areas are conventionally treated as isocortex, so non_neocortex is incorrect. | Cingulate cortex is standard isocortex/neocortex ROI in rodent atlases. | |
| contralateral prostriata | prostriata | 10 | non_neocortex | neocortex | suitable | pro | Prostriata is allocortex, thus non-neocortex, suitable ROI. | Prostriata is a visual cortical area in mice, part of isocortex; contralateral descriptor does not change region class. | Prostriata is a visual cortical area in mouse, part of isocortex. | |
| RSg | granular retrosplenial cortex | 10 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is isocortex in rodent atlases; current non_neocortex is misclassified. | RSg = granular retrosplenial cortex; standard cortical projection ROI assigned to isocortex/neocortex in rodent atlases. | Retrosplenial cortex is treated as isocortex/neocortex in rodent atlases; current non_neocortex is wrong. | |
| lIns | left insula | 9 | non_neocortex | neocortex | suitable | flash | Insula is standard isocortical projection ROI; non_neocortex label incorrect. | Left insula is insular cortex; atlas conventions treat insular cortex as neocortical projection ROI despite dysgranular sectors. | Insula is treated as isocortex/neocortex in rodent atlases; 'left insula' is suitable, current non_neocortex is wrong. | |
| anterior cingulate | anterior cingulate cortex | 8 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex is ACC, a standard isocortical ROI in atlases. | Anterior cingulate cortex is a standard cortical projection ROI, conventionally treated as cortical in atlas-based mapping. | ACC is treated as neocortex/isocortex in standard atlases; current non_neocortex is wrong. | |
| sgCC | subgenual anterior cingulate cortex | 8 | non_neocortex | neocortex | suitable | flash | Subgenual anterior cingulate cortex is a standard cingulate projection ROI conventionally treated as neocortex-like; prior non_neocortex label is incorrect. | Subgenual ACC is cingulate cortex; ACC is standard neocortex ROI, so non_neocortex is wrong. | |
| sgC | subgenual cingulate cortex | 7 | non_neocortex | neocortex | suitable | flash | Subgenual cingulate cortex is ACC-related isocortex; current non_neocortex mislabeled. | Subgenual cingulate cortex is a standard cingulate/PFC projection ROI; treat as neocortex despite mesocortical features. | Subgenual cingulate cortex is part of ACC, treated as isocortex in rodent atlases. | |
| ACAd | anterior cingulate cortex, dorsal | 6 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex is isocortex in rodent atlases; current non_neocortex is incorrect. | ACAd is dorsal anterior cingulate cortex, a standard rodent cortical projection ROI; should be neocortex, not non_neocortex. | ACAd is anterior cingulate cortex, a standard isocortex ROI, not non-neocortex. | |
| AID | anterior agranular insular cortex | 6 | non_neocortex | neocortex | suitable | flash | AID is anterior agranular insular cortex; insula treated as isocortex/neocortex in rodent atlases. | AID is insular cortex, a standard isocortex/projection ROI; current non_neocortex is misclassified. | Anterior agranular insular cortex is insular cortex; in rodent atlases this is treated as isocortex/neocortex. | |
| posterior cingulate | posterior cingulate cortex | 6 | non_neocortex | neocortex | suitable | flash | Posterior cingulate cortex is cingulate/isocortex; should be neocortex, not non_neocortex. | Posterior cingulate cortex is a standard cortical projection ROI, conventionally treated as isocortex; not non-neocortex. | Posterior cingulate cortex is a cingulate/isocortical projection ROI; should be neocortex. | |
| aRSC | anterior retrosplenial cortex | 5 | non_neocortex | neocortex | suitable | flash | Anterior retrosplenial cortex is treated as isocortex in rodent atlases; should be neocortex. | aRSC is anterior retrosplenial cortex; standard rodent projection ROI, conventionally treated as cortical/neocortex-like in atlas mapping. | Retrosplenial cortex is treated as isocortex in rodent atlases; should be neocortex. | |
| cACC | cingulate anterior cortex | 5 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex (ACC) is isocortex in rodent atlases; should be neocortex. | cACC is anterior cingulate cortex; mesocortical but standard projection ROI; pragmatically neocortex for RCS mapping. | |
| dRSC | dysgranular retrosplenial cortex | 5 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is standard projection ROI treated as isocortex; current non-neocortex is wrong. | Retrosplenial cortex is a standard limbic cortical ROI conventionally treated as cortical projection endpoint, not allocortex; current non_neocortex is incorrect. | Retrosplenial cortex treated as isocortex in rodent atlases; current non_neocortex is wrong. | |
| RS | retrosplenial | 5 | non_neocortex | neocortex | suitable | flash | Retrosplenial is a standard isocortical ROI in rodents; current non_neocortex is misclassified. | Retrosplenial cortex is cortical gray matter conventionally treated as neocortex in rodent atlases. | Retrosplenial is standard ROI treated as isocortex; current non_neocortex label is wrong. | |
| RSPv | retrosplenial cortex ventral | 5 | non_neocortex | neocortex | suitable | flash | RSPv is a retrosplenial cortex subdivision; treated as isocortex, so current non_neocortex is wrong. | RSPv is retrosplenial cortex ventral, a standard projection ROI treated as isocortex-like in rodent atlases; current non_neocortex is wrong. | RSPv is ventral retrosplenial cortex; treated as isocortex in rodent atlases. | |
| Cg1/2 | cingulate cortex | 4 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Cg1/2 are mouse cingulate areas; cingulate/ACC is treated as isocortex, but slash combines two separate regions. | Cg1/2 are anterior cingulate isocortical areas; combined ROI unsuitable. | Cingulate cortex is isocortex in rodent atlases, but Cg1/2 combines Cg1 and Cg2 into a compound ROI. |
| granular retrosplenial cortex | granular retrosplenial cortex | 4 | non_neocortex | neocortex | suitable | flash | Granular retrosplenial cortex is treated as isocortex/neocortex in rodent atlases; non_neocortex is incorrect. | Granular retrosplenial cortex is a standard cortical projection ROI; rat atlas convention treats retrosplenial cortex as neocortex, not allocortex. | Granular retrosplenial cortex is isocortex/retrosplenial area in rodent atlases; non_neocortex is wrong | |
| parietal DI | parietal dysgranular insula | 4 | non_neocortex | neocortex | suitable | flash | Parietal dysgranular insula is insular cortex; insula is treated as isocortex in rodent atlases. | Dysgranular insula is an insular cortical ROI; rodent atlases conventionally treat insular cortex as isocortex-like projection territory, so reclassify as neocortex. | Dysgranular insula is insular cortex; insula treated as isocortex in atlases. | |
| RSCg | Retrosplenial cortex, granular area | 4 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is treated as isocortex; current non-neocortex is wrong. | Retrosplenial granular cortex is a standard cortical projection ROI and is conventionally treated as neocortex in rodent atlases; current non_neocortex is incorrect. | Retrosplenial cortex is standard isocortex; RSCg should be neocortex, not non_neocortex. | |
| ACC A25 | anterior cingulate cortex A25 | 3 | non_neocortex | neocortex | suitable | flash | ACC is treated as neocortex; current non_neocortex conflicts. | Anterior cingulate cortex area 25 is a cingulate cortical projection ROI; treated as neocortex by convention, so current non_neocortex label is incorrect. | ACC is a standard isocortical projection ROI; A25 is a concrete cingulate gray-matter area, so should be neocortex. | |
| left posterior cingulate gyrus | 3 | non_neocortex | neocortex | suitable | flash | Posterior cingulate gyrus is cingulate cortex, treated as neocortex; current non_neocortex is wrong. | Posterior cingulate gyrus is isocortex/neocortex; current non_neocortex is likely wrong. | Posterior cingulate gyrus is cingulate cortex; treated as isocortex/neocortex, so non_neocortex label is wrong. | ||
| 24 | 2 | non_neocortex | neocortex | suitable | pro | Just '24' ambiguous; could be area 24 (neocortex) or another structure; no species, unresolved. | Area 24 = anterior cingulate cortex (isocortex/neocortex). Standard ROI. | Brodmann area 24 is anterior cingulate cortex, a neocortical region; current classification as non-neocortex is incorrect. | ||
| A23V | 2 | non_neocortex | neocortex | suitable | flash | A23V is marmoset area 23 ventral, posterior cingulate/isocortex; not non_neocortex. | Marmoset A23V is area 23 ventral, a posterior cingulate/isocortical area, not non-neocortex; mappable cortical ROI. | A23V = marmoset cingulate area 23v, isocortex; current non_neocortex is incorrect. | ||
| ACAa | 2 | non_neocortex | neocortex | suitable | flash | ACAa likely anterior cingulate area a; ACC is isocortex in rodent atlas, so should be neocortex. | ACAa is an anterior cingulate area subdivision; ACC/cingulate is isocortex in rodent atlases. | ACAa is anterior cingulate area (isocortex); non_neocortex label is incorrect. | ||
| ACC A24a | anterior cingulate cortex A24a | 2 | non_neocortex | neocortex | suitable | flash | ACC/A24a is anterior cingulate cortex, standard isocortex; current non_neocortex is wrong. | ACC A24a is anterior cingulate cortex; standard rodent cingulate treated as isocortex. | Anterior cingulate cortex A24a is isocortex; should not be non_neocortex. | |
| ACC layer II/III | anterior cingulate cortex layer II/III | 2 | non_neocortex | neocortex | unsuitable | layer_only | flash | ACC is isocortex but this is layer II/III only, not a suitable gray-matter ROI. | ACC is isocortical in rodent atlases, but layer II/III is a lamina-specific division, not a whole gray-matter ROI. | ACC is neocortex but layer II/III is layer-only, not a region-level RCS target. |
| ACd | anterior dorsal cingulate | 2 | non_neocortex | neocortex | suitable | flash | Anterior dorsal cingulate is also ACC/isocortex; non_neocortex classification incorrect. | Dorsal anterior cingulate is isocortex in rodent atlas and is a concrete cortical gray-matter ROI. | ACd / anterior dorsal cingulate is isocortical; non_neocortex label is wrong. | |
| area 24 | area 24 | 2 | non_neocortex | neocortex | suitable | flash | Brodmann area 24 is anterior cingulate cortex, a standard neocortical/projection ROI; current non_neocortex is wrong. | Area 24 is anterior cingulate cortex (ACC), a standard projection ROI. Atlas/mapping pragmatism treats ACC as neocortex, so non_neocortex is incorrect. | Brodmann area 24 is anterior cingulate cortex; ACC is treated as neocortex. | |
| cingulated gyrus | cingulated gyrus | 2 | non_neocortex | neocortex | suitable | flash | Cingulate gyrus is cingulate cortex and should be neocortex, not non-neocortex. | Cingulate gyrus is cingulate cortex/gyrus; per guidelines cingulate usages are treated as neocortex, so prior non_neocortex label should be corrected. | Cingulate gyrus is cingulate cortex; ACC/retrosplenial are treated as isocortex, so non_neocortex is wrong. | |
| dysgranular RSC layer 2/3 | 2 | non_neocortex | neocortex | unsuitable | layer_only | flash | RSC is retrosplenial cortex (treated as neocortex); layer 2/3 makes ROI unsuitable. | dysgranular RSC is a conventional retrosplenial cortex projection ROI; per guidelines this should be treated as neocortex. Layer 2/3 is mappable with the region. | RSC is neocortex per atlas, but layer 2/3 term makes ROI layer-specific; unsuitable. | |
| granular insular cortex | agranular insular cortex | 2 | non_neocortex | neocortex | suitable | flash | Insular cortex is treated as isocortex/neocortex in rodent atlases; current non-neocortex is incorrect. | Insula/agranular insular area is isocortex in rodent atlases; current non_neocortex incorrect. | Insular cortex is isocortex in rodent atlases; non-neocortex label is wrong. | |
| layer 3 dorsal prostriata | layer 3 of dorsal prostriata | 2 | non_neocortex | neocortex | unsuitable | layer_only | pro | Prostriata is a cortical area; layer 3 indicates isocortex. Current class is non_neocortex, so mismatch. Layer specification makes it unsuitable. | Layer-only mention, not a full region. Dorsal prostriata likely neocortex | Layer 3 of dorsal prostriata, transitional cortex, so layer-only and unsuitable. |
| ld dorsal prostriata | ld (lamina dissecans) of dorsal prostriata | 2 | non_neocortex | neocortex | suitable | unresolved | no_vote_majority; contamination_suspect → neocortex. Lamina dissecans (ld) is a cortical layer, not an ROI; unsuitable for RCS mapping. | |
| left dorsal ACC | dorsal anterior cingulate cortex | 2 | non_neocortex | neocortex | suitable | flash | dorsal ACC is anterior cingulate cortex, treated as isocortex. | Dorsal ACC is a standard cingulate projection ROI; cingulate usages are treated as neocortex, so non_neocortex is incorrect. | ACC is treated as isocortex/neocortex in rodent atlas convention; current non_neocortex label is incorrect. | |
| left paracingulate gyrus | left paracingulate gyrus | 2 | non_neocortex | neocortex | suitable | flash | Paracingulate gyrus is medial frontal neocortex; concrete gyrus ROI. | Paracingulate gyrus is a medial frontal cortical gyrus and should be neocortex; current non_neocortex is incorrect. | Paracingulate gyrus is a medial frontal cortical gyrus, therefore neocortex; current non_neocortex label is wrong. | |
| right dorsal ACC | right dorsal anterior cingulate cortex | 2 | non_neocortex | neocortex | suitable | flash | ACC is standard isocortex/projection ROI; current non_neocortex is incorrect. | ACC is cingulate mesocortex conventionally treated as isocortex/projection ROI in rodent atlases; should be neocortex. | ACC is standard rodent isocortex; current non_neocortex is a contamination error. | |
| sACC | subgenual anterior cingulate cortex | 2 | non_neocortex | neocortex | suitable | flash | sACC/ACC is isocortex per rules; non_neocortex labeling is wrong. | sACC is subgenual anterior cingulate cortex; ACC is treated as neocortex. | Subgenual ACC is anterior cingulate cortex, treated as isocortex; current non_neocortex is wrong. | |
| ventral anterior cingulate | 2 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex is isocortex/neocortex; ventral ACC is cortical gray matter. | Ventral anterior cingulate is a standard cortical/PFC projection ROI treated as neocortex; current non-neocortex label is incorrect. | Anterior cingulate cortex is treated as isocortex in reference atlases; current non_neocortex is mislabel. | ||
| A24a' | medial cingulate cortex A24a' | 1 | non_neocortex | neocortex | suitable | flash | Medial cingulate cortex A24a' is isocortex; current non-neocortex is misclassified. | Medial cingulate area A24a' is a standard cingulate cortical ROI and is conventionally treated as neocortex in atlases. | A24a' medial cingulate is ACC/isocortex; non_neocortex label is wrong. | |
| A24a'/A24b' | middle cingulate cortex | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Middle cingulate cortex is isocortex, but A24a'/A24b' is a compound of two areas. | Middle cingulate cortex subdivision is a cortical projection ROI; cingulate mesocortex is conventionally treated as neocortex in atlases. | A24a'/A24b' cingulate is isocortex but slash compound is not a single ROI. |
| A24a/A24b | anterior cingulate cortex | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Compound A24a/A24b is ACC isocortex but combines two subdivisions; not a single RCS ROI. | Anterior cingulate cortex is a standard cortical ROI; should be neocortex, not non_neocortex. | A24a/A24b is cingulate (isocortex), but slash compound is not a single ROI; current non_neocortex wrong. |
| A24b' | medial cingulate cortex A24b' | 1 | non_neocortex | neocortex | suitable | flash | Medial cingulate cortex A24b' is isocortex; current non_neocortex is incorrect. | Medial cingulate A24b' is a cingulate cortical subdivision, conventionally treated as neocortex for projection mapping. | A24b' is medial cingulate/isocortex in rodent atlas; current non_neocortex incorrect. | |
| A29c | A29c | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial area A29c is isocortex; current non_neocortex is incorrect. | A29c is retrosplenial cortex (BA29 granular c), a standard cortical projection ROI treated as isocortex/mesocortex in atlases; current non_neocortex is inconsistent. | A29c is retrosplenial cortex, treated as isocortex; current non_neocortex wrong. | |
| A30 | A30 | 1 | non_neocortex | neocortex | suitable | flash | Area A30 is retrosplenial cortex isocortex; current non_neocortex is incorrect. | A30 is retrosplenial/cingulate cortex (BA30), a standard cortical projection ROI; atlas convention favors neocortex, so current non_neocortex is wrong. | A30 is retrosplenial/cingulate isocortex; current non_neocortex incorrect. | |
| anterior insular | anterior insular cortex | 1 | non_neocortex | neocortex | suitable | flash | Anterior insular cortex is insula/neocortex; current non_neocortex is incorrect. | Anterior insular cortex is agranular/dysgranular mesocortex but is conventionally treated as a neocortical projection ROI in atlas mapping. | Anterior insular cortex is treated as neocortex; current non_neocortex is incorrect. | |
| anterior insular cortex | 1 | non_neocortex | neocortex | suitable | flash | Anterior insular cortex is a concrete neocortical ROI; should not be non_neocortex. | Anterior insular cortex is an agranular/dysgranular insular ROI conventionally treated as isocortex in rodent atlases; prefer neocortex. | Anterior insular cortex is treated as neocortex; current non_neocortex is incorrect. | ||
| area 25 | 1 | non_neocortex | neocortex | suitable | flash | Area 25 is Brodmann area 25, subgenual cingulate cortex; treated as neocortex | Area 25 = Brodmann/subgenual cingulate cortex; cingulate projection ROI treated as neocortex, so current non_neocortex label is incorrect. | Area 25 is subgenual ACC/PFC isocortex; current non_neocortex is misclassified. | ||
| caudal cingulate zone | caudal cingulate zone | 1 | non_neocortex | neocortex | suitable | flash | Caudal cingulate zone is a cingulate cortical region (isocortex), so current non_neocortex is wrong. | Caudal cingulate zone is cingulate cortex, conventionally treated as neocortical projection ROI in rodent atlases. | Caudal cingulate zone belongs to cingulate cortex, treated as isocortex; current non_neocortex is wrong. | |
| caudal Ins cortex | caudal insular cortex | 1 | non_neocortex | neocortex | suitable | flash | Insular cortex is treated as isocortex in rodent atlases; caudal insular area is a valid RCS region. | Insular cortex is a standard isocortex/projection ROI; should be neocortex, not non_neocortex. | Insular cortex is standard isocortex in rodent atlases; current non_neocortex is incorrect. | |
| cingulate gyrus | cingulate gyrus | 1 | non_neocortex | neocortex | suitable | flash | Cingulate gyrus is cortical and contains ACC/retrosplenial, treated as neocortex. | Cingulate gyrus is a standard cortical projection ROI; treat as neocortex per convention though partly mesocortex. | Cingulate gyrus is cingulate cortex, standard isocortical ROI; should be neocortex. | |
| cingulate zones | cingulate zones | 1 | non_neocortex | neocortex | unsuitable | too_broad | flash | Cingulate implies neocortex, but 'zones' is plural/unspecified and too broad. | Cingulate zones are cortical gray matter; cingulate is treated as neocortex in rodent atlases, but 'zones' is too broad for a map query. | Cingulate zones imply cingulate cortex but the name is vague and plural, not a concrete ROI. |
| cingulo-insular areas | cingulo-insular areas | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Cingulate and insular areas are neocortical; plural compound not single ROI. | Cingulate and insular areas are cortical (neocortex-like in mouse atlases), but the name combines multiple regions rather than one mappable ROI. | Cingulate and insular cortex are neocortical; combined multi-region unsuitable. |
| DLO1 | dysgranular insular cortex 1 | 1 | non_neocortex | neocortex | suitable | flash | Dysgranular insular cortex is insular cortex, treated as neocortex in rodent atlases; current non_neocortex is wrong. | Dysgranular insular cortex is insula; insula treated as isocortex in rodents, so neocortex. | Dysgranular insular cortex is isocortex in rodent atlases; current non_neocortex is wrong. | |
| DLO2 | dysgranular insular cortex 2 | 1 | non_neocortex | neocortex | suitable | flash | Dysgranular insular cortex is insular cortex, treated as neocortex in rodent atlases; current non_neocortex is wrong. | Dysgranular insular cortex is a standard insular cortical ROI; rodent atlas convention treats this as neocortical, so current non_neocortex is incorrect. | Dysgranular insular cortex is isocortex in rodent atlases; current non_neocortex is wrong. | |
| dorsal anterior cingulate cortex (Cg1) | dorsal anterior cingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | Dorsal anterior cingulate cortex (Cg1) is ACC, a standard neocortical projection ROI; current non_neocortex is wrong. | Dorsal anterior cingulate cortex (Cg1) is a standard cingulate/isocortical projection ROI; treat as neocortex per atlas convention. | Anterior cingulate cortex is isocortex in rodent atlases; current non_neocortex is wrong. | |
| dorsal part of the agranular insular area | 1 | non_neocortex | neocortex | suitable | flash | Insular cortex treated as isocortex/neocortex in rodent atlases; current non_neocortex is wrong. | Agranular insular area is a standard insular projection ROI conventionally treated as neocortex/isocortex in rodent atlases. | Agranular insular area is insular cortex; treat as isocortex in rodent atlases. | ||
| dorsoventral retrosplenial cortex | dorsoventral (granular) retrosplenial cortex | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is isocortex in rodent atlases; current non_neocortex is incorrect. | Granular retrosplenial cortex is a standard cortical projection ROI treated as isocortex/mesocortex in rodent atlases; not non-neocortex. | Retrosplenial cortex is a standard projection ROI; treat as isocortex in rodent atlases. | |
| DV(gr.)RtSpl | dorsoventral (granular) retrosplenial cortex | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is treated as isocortex/projection ROI in rodent atlases, so should be neocortex. | Granular/dorsoventral retrosplenial cortex is a standard cortical projection ROI; treat as neocortex per atlas convention. | Retrosplenial cortex is treated as neocortex; current non_neocortex is wrong. | |
| dysgranular insula | dysgranular insula | 1 | non_neocortex | neocortex | suitable | flash | Insula is standard isocortex/projection ROI; dysgranular insula is a specific cortical subregion. | Dysgranular insula is insular cortical gray matter, conventionally treated as a cortical projection ROI rather than non-neocortex. | Dysgranular insula is insular cortex, should be neocortex; non_neocortex is wrong. | |
| FIC | frontoinsular cortex | 1 | non_neocortex | neocortex | suitable | flash | FIC is frontoinsular cortex; insula is a standard projection ROI treated as neocortex. | Frontoinsular cortex is a concrete cortical gray-matter ROI and is conventionally treated as isocortex-like in atlas mapping; not clear allocortex. | FIC/frontoinsular cortex is insular cortex, treated as isocortex; current non_neocortex is wrong. | |
| ipsilateral ACC | anterior cingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | ACC is treated as isocortex/neocortex; current non_neocortex is incorrect. | ACC is anterior cingulate cortex, conventionally atlas-treated as isocortex-like cortical projection ROI. | |
| L(ag.)RtSpl | lateral (agranular) retrosplenial cortex | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is standard isocortex in rodent atlases; current non_neocortex is incorrect. | Lateral agranular retrosplenial cortex is a standard cortical projection ROI; per atlas convention treat as neocortex despite agranular mesocortex. | |
| L-Cingulate-post | Left posterior cingulate gyrus | 1 | non_neocortex | neocortex | suitable | flash | Posterior cingulate/retrosplenial is isocortex in rodent atlases; current non_neocortex is misclassified. | Posterior cingulate/retrosplenial cortex is treated as isocortex in standard atlases; non_neocortex is mislabeled. | Posterior cingulate is cingulate cortex, a standard isocortical ROI; non_neocortex label is wrong. | |
| L5 ACC | layer 5 anterior cingulate cortex pyramidal neurons | 1 | non_neocortex | neocortex | unsuitable | cell_type_or_marker | flash | ACC is isocortex; L5/pyramidal cell-type restriction makes it unsuitable for region mapping. | Anterior cingulate cortex is standard neocortical projection ROI; layer/cell-type modifiers do not block mapping. |
| L5 CP neurons in IL cortex | layer 5 cortico-PAG neurons in infralimbic cortex | 1 | non_neocortex | neocortex | unsuitable | cell_type_or_marker | flash | IL is neocortical PFC; L5/cortico-PAG projection neurons not a mappable gray-matter ROI. | Infralimbic cortex is a neocortical PFC region; cortico-PAG projection neurons still map to IL cortex. | IL is mouse PFC neocortex, so non_neocortex is wrong. L5 cortico-PAG neurons are a layer/cell-type subpopulation, not whole IL cortex. |
| L5 CP neurons in PL cortex | layer 5 cortico-PAG neurons in prelimbic cortex | 1 | non_neocortex | neocortex | unsuitable | cell_type_or_marker | flash | PL is neocortical PFC; L5/cortico-PAG projection neurons not a mappable gray-matter ROI. | Prelimbic cortex is a neocortical PFC region; cortico-PAG projection neurons still map to PL cortex. | PL is mouse PFC neocortex, so non_neocortex is wrong. L5 cortico-PAG neurons are a layer/cell-type subpopulation, not whole PL cortex. |
| lateral (agranular) retrosplenial | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is isocortex in rodent atlases; current non_neocortex is wrong. | Lateral agranular retrosplenial is retrosplenial cortex, treated as isocortex in rodent atlases. | Retrosplenial cortex is isocortex in rodent atlases; lateral agranular subdivision. | ||
| lateral retrosplenial cortex | lateral (agranular) retrosplenial cortex | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is treated as isocortex in rodent atlases, so current non_neocortex label is wrong. | Lateral agranular retrosplenial cortex is a standard rodent cortical projection ROI and conventionally treated as isocortex-like in atlases. | Retrosplenial cortex is treated as isocortex in rodent atlases; non_neocortex is incorrect. | |
| left ACC | anterior cingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | ACC is a standard cingulate/isocortical ROI in rodents; non_neocortex is incorrect. | ACC = anterior cingulate cortex, a standard cortical projection ROI treated as isocortex/mesocortex; not non-neocortex. | ACC is standard projection ROI treated as neocortex; non_neocortex label is wrong. | |
| left insula | left insula | 1 | non_neocortex | neocortex | suitable | flash | Insula is treated as isocortical projection ROI; current non_neocortex classification is wrong. | Left insula is insular cortex, a standard cortical ROI; despite parts being agranular/dysgranular, atlas usage favors neocortex. | Insula is standard projection ROI treated as neocortex; non_neocortex label is wrong. | |
| M2-projecting RSCg neurons | M2-projecting rostral retrosplenial cortex, granular neurons | 1 | non_neocortex | neocortex | unsuitable | cell_type_or_marker | flash | RSCg is retrosplenial cortex, treated as isocortex; M2-projecting neurons are a projection-defined population, not a region. | RSCg is retrosplenial cortex (treated as isocortex) so neocortex; but projection-defined neurons are unsuitable. | RSCg is retrosplenial cortex (neocortex); projection-defined neurons are cell-type, unsuitable. |
| mCg | middle cingulate | 1 | non_neocortex | neocortex | suitable | flash | mCg is middle cingulate cortex; cingulate treated as isocortex in rodent atlases. | Middle cingulate is a cingulate cortex ROI; mesocortical cingulate regions are conventionally treated as neocortical projection targets. | Cingulate cortex is isocortex in rodent atlases; mCg is a concrete gray-matter ROI. | |
| midcingulate | midcingulate | 1 | non_neocortex | neocortex | suitable | flash | Midcingulate is cingulate cortex; treated as isocortex/neocortex, not non-neocortex. | Midcingulate is a cingulate cortical projection area, conventionally treated as cortical gray matter; should be neocortex, not non_neocortex. | Midcingulate is cingulate cortex, treated as isocortex in atlas conventions; current non_neocortex label is wrong. | |
| midcingulate cortex | midcingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | Midcingulate cortex is cingulate cortex, treated as isocortex in rodent atlases; current non_neocortex is incorrect. | Rat midcingulate cortex is a standard cingulate/isocortical ROI in atlases; clear neocortical structure, so current non_neocortex is incorrect. | Midcingulate cortex belongs to cingulate cortex, which is neocortex; non_neocortex label is incorrect. | |
| midcingulo-insular cortex | midcingulo-insular cortex | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Compound of midcingulate and insular cortices; both cortical, but not a single RCS ROI. | Combines midcingulate and insular cortex; both neocortical but need separate mapping. | Compound of midcingulate and insular cortices; not a single ROI for RCS mapping. |
| middle cingulate gyrus | cingulate gyrus | 1 | non_neocortex | neocortex | suitable | flash | Middle cingulate gyrus is part of cingulate cortex; cingulate is treated as isocortex, so neocortex not non_neocortex. | Cingulate cortical areas are treated as isocortex in rodent atlases; middle cingulate gyrus should be neocortex. | Cingulate gyrus is cingulate cortex, treated as neocortex; non_neocortex label is suspect. | |
| mpITC | medial posterior insula temporal cortex | 1 | non_neocortex | neocortex | suitable | flash | Insula and temporal cortex are neocortex; current non-neocortex is wrong; compound/broad ROI. | Insula/temporal cortex are isocortex in rodents; current non_neocortex is wrong. | mpITC is insular/temporal cortex, an isocortical region; current non_neocortex is mislabeled. | |
| posterior agranular insular cortex | posterior agranular insular cortex | 1 | non_neocortex | neocortex | suitable | flash | Posterior agranular insular cortex; insula treated as isocortex/projection ROI, so should be neocortex. | Agranular insular cortex is insula; insula treated as isocortex/neocortex in rodent atlases. Current non_neocortex wrong. | Posterior agranular insular cortex is insula; insula is treated as isocortex in rodent atlases. | |
| posterior cingulate/retrosplenial cortex | posterior cingulate/retrosplenial cortex | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Posterior cingulate and retrosplenial are neocortical; slash compound not single ROI. | Posterior cingulate/retrosplenial cortex is a standard rodent cortical gray-matter ROI, conventionally treated as isocortical projection target. | Posterior cingulate/retrosplenial is neocortical, but slash name is a multi-region compound. |
| R aIC | right anterior insula cortex | 1 | non_neocortex | neocortex | suitable | flash | Right anterior insula cortex is isocortical in rodents; non_neocortex is incorrect. | Right anterior insula cortex is a standard cortical projection ROI; insula usages are conventionally treated as neocortex-oriented in atlases. | Anterior insular cortex is standard isocortex; right anterior insula is a mappable ROI | |
| R-ACC-pre | Right anterior cingulate cortex, pregenual | 1 | non_neocortex | neocortex | suitable | flash | Pregenual right ACC is isocortical in rodents; non_neocortex is incorrect. | Pregenual ACC is a clear anterior cingulate cortex projection ROI commonly mapped as neocortex, not non-neocortex. | ACC is treated as isocortex; pregenual right ACC is a concrete mappable ROI | |
| retrosplenial area | retrosplenial area | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is treated as isocortex in rodent atlases; current non_neocortex is incorrect. | Retrosplenial area is a standard cortical projection ROI conventionally treated as isocortex in rodent atlases; current non_neocortex is incorrect. | Retrosplenial area is a standard projection ROI treated as isocortex in rodent atlases; current non_neocortex is wrong. | |
| right ACC | anterior cingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | ACC (anterior cingulate cortex) is a standard isocortical projection ROI; non_neocortex label is incorrect. | ACC is standard isocortex in rodent atlases; should be neocortex, not non_neocortex. | ACC = anterior cingulate cortex, treated as isocortex in rodent atlases; current non_neocortex is incorrect. | |
| right AI | right anterior insula | 1 | non_neocortex | neocortex | suitable | flash | Anterior insula is a standard projection ROI treated as isocortex; should be neocortex. | Anterior insula (AI) is insular cortex, treated as isocortex; should be neocortex not non_neocortex. | Anterior insula (AI) is insular isocortex per mapping; non_neocortex is wrong. | |
| right aMCC | right anterior middle cingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | Middle cingulate cortex is isocortical cingulate projection ROI; should be neocortex. | aMCC is anterior middle cingulate cortex, neocortical cingulate; current non_neocortex is wrong. | aMCC is cingulate cortex, a standard isocortex ROI; current non_neocortex is wrong. | |
| right anterior cingulate gyrus | 1 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex/gyrus is standard isocortical projection ROI; should be neocortex. | Right anterior cingulate gyrus is a standard cortical projection ROI; cingulate cortex is conventionally treated as isocortex-like in mapping atlases. | Anterior cingulate gyrus is cingulate/isocortex ROI; non_neocortex is incorrect. | ||
| right dACC | right dorsal anterior cingulate cortex | 1 | non_neocortex | neocortex | suitable | flash | dACC = dorsal anterior cingulate cortex, an isocortical projection ROI; non_neocortex label is wrong. | dACC (dorsal anterior cingulate cortex) is a clear standard acronym for a cingulate cortical ROI; current non_neocortex label is contamination. | dorsal anterior cingulate cortex is cingulate cortex, treated as isocortex in rodent atlases | |
| right PCC | 1 | non_neocortex | neocortex | suitable | flash | PCC = posterior cingulate cortex; cingulate/retrosplenial isocortical ROI, so non_neocortex is wrong. | PCC is a standard acronym for posterior cingulate cortex, a cortical gray-matter projection ROI conventionally treated as neocortex/cingulate cortex. | PCC is posterior cingulate cortex, standard isocortical projection region, not non-neocortex |
Flips — neocortex → non_neocortex
| structure_name | fullname | n_mentions | region_class_before | region_class | suitability | unsuitable_reason | audit_stage | audit_reason | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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All class corrections
showing 120 / 244
| structure_name | fullname | n_mentions | region_class_before | region_class | suitability | unsuitable_reason | audit_stage | audit_reason |
|---|---|---|---|---|---|---|---|---|
| ACC | anterior cingulate cortex | 261 | non_neocortex | neocortex | suitable | flash | ACC is treated as isocortex in rodent atlases, so non_neocortex is incorrect. | ACC/anterior cingulate cortex is standard projection ROI; rodent atlases treat cingulate as isocortex-like neocortex. | ACC is anterior cingulate cortex, treated as isocortex in rodent atlases; non-neocortex label is incorrect. | |
| prostriata | area prostriata | 41 | ambiguous | neocortex | suitable | flash | Prostriata is a cortical area in rat atlas, part of isocortex; should be neocortex, not ambiguous. | Area prostriata is a cortical gray-matter field treated as isocortex in standard atlases, not allocortex. | Area prostriata is part of retrosplenial/isocortical cortex, so ambiguous should be neocortex. | |
| PCC | posterior cingulate cortex | 39 | non_neocortex | neocortex | suitable | flash | Posterior cingulate cortex is isocortex/limbic cortex; current non_neocortex is misclassified. | Posterior cingulate cortex is a cingulate/isocortex-like projection ROI, not clear allocortex. | PCC is posterior cingulate cortex, treated as isocortical projection ROI; non_neocortex is suspect. | |
| aIC | anterior insular cortex | 32 | non_neocortex | neocortex | suitable | flash | Anterior insular cortex is isocortex in rodent atlases; current non-neocortex is incorrect. | Anterior insular cortex is a standard cortical projection ROI; rodent insula is conventionally treated as isocortex-like. | Anterior insular cortex is insula; rodent atlases treat insula as neocortex, so non_neocortex is wrong. | |
| retrosplenial cortex | retrosplenial cortex | 30 | ambiguous | neocortex | suitable | flash | Retrosplenial cortex treated as isocortex in rodent atlases; current ambiguous should be neocortex. | Retrosplenial cortex is a standard cortical projection ROI; rodent atlases treat it as cortical gray matter, so neocortex is preferred. | Retrosplenial cortex is isocortex in rodent atlases; current ambiguous should be neocortex. | |
| L2/3 | Layer 2/3 | 28 | ambiguous | other | unsuitable | layer_only | flash | Layer 2/3 is a cortical layer designation, not a standalone gray-matter region. | Layer 2/3 is a cortical layer designation without a mappable region, not a concrete anatomical ROI. | Layer 2/3 is a cortical layer designation, not a discrete gray-matter ROI for RCS mapping. |
| anterior cingulate cortex | anterior cingulate cortex | 26 | non_neocortex | neocortex | suitable | flash | ACC is treated as isocortex for standard projection ROIs; current non_neocortex mismatch. | ACC is a standard cingulate/cortical projection ROI, conventionally treated as neocortex/mesocortex for circuit mapping. | Anterior cingulate cortex is standard projection ROI treated as isocortex; should be neocortex. | |
| cingulate cortex | cingulate cortex | 23 | non_neocortex | neocortex | suitable | flash | Cingulate cortex corresponds to ACC/isocortex in rodent atlases; should be neocortex. | Cingulate cortex is a standard cortical projection ROI; in rodent atlases it is conventionally treated as isocortex/mesocortex, so neocortex. | Cingulate cortex is cortical; ACC/retrosplenial treated as isocortex in rodent atlases. | |
| MOC | medial olivocochlear | 20 | non_neocortex | other | unsuitable | cell_type_or_marker | flash | MOC is a neuron population/efferent pathway, not a discrete gray-matter ROI. | Medial olivocochlear is an efferent fiber pathway/neuronal system, not a gray-matter brain region. | Medial olivocochlear refers to a specific neuron population/pathway, not a discrete gray matter ROI. |
| PV2 cluster | PV2 cluster | 18 | ambiguous | other | unsuitable | cell_type_or_marker | flash | PV2 cluster is not a standard anatomical region; ambiguous, unsuitable for RCS mapping. | PV2 cluster is a parvalbumin-cell cluster/type label, not a concrete anatomical gray-matter region, so it is unsuitable as an RCS test query. | PV2 cluster is a cell cluster/marker label, not an anatomical gray-matter region. |
| pACC | posterior anterior cingulate cortex | 17 | non_neocortex | neocortex | suitable | flash | pACC is anterior cingulate cortex; ACC treated as isocortex, so neocortex; current non-neocortex mismatch. | Posterior anterior cingulate cortex is a cingulate cortical ROI; treat as neocortex per atlas pragmatism. | pACC is part of cingulate cortex; ACC is standard neocortex/projection ROI, so non_neocortex is wrong | |
| anterior insula | anterior insula | 16 | non_neocortex | neocortex | suitable | flash | Anterior insula is insular cortex; treated as isocortex, so neocortex; current non-neocortex mismatch. | Anterior insula is a standard insular cortical projection ROI; despite mesocortical features, treat as neocortex per guidance. | Anterior insula is insular cortex, a standard projection ROI treated as neocortex; current non_neocortex is wrong | |
| sgACC | subgenual anterior cingulate cortex | 16 | non_neocortex | neocortex | suitable | flash | Subgenual anterior cingulate cortex is ACC, treated as neocortex in standard atlases. | sgACC (subgenual anterior cingulate cortex) is a cingulate cortical ROI; treat as neocortex despite mesocortical specializations. | Cingulate/ACC projection ROI counts as neocortex; non_neocortex label is incorrect. | |
| RSPd | dorsal retrosplenial cortex | 15 | ambiguous | neocortex | suitable | flash | Retrosplenial cortex is treated as neocortex/isocortex; ambiguous label is incorrect. | RSPd is dorsal retrosplenial cortex, a standard rodent cortical projection ROI; retrosplenial usages are treated as neocortex by convention. | Retrosplenial cortex is an isocortical projection ROI; should be neocortex, not ambiguous. | |
| Cg | cingulate cortex | 13 | ambiguous | neocortex | suitable | flash | Cingulate cortex is isocortical/ACC-related in rodent atlases; neocortex, not allocortex. | Cingulate cortex is a standard cortical projection ROI; treated as neocortex in rodent atlases. | Cingulate cortex is a standard rodent cortical ROI treated as isocortex/neocortex; ambiguous label is incorrect. | |
| pgACC | perigenual anterior cingulate cortex | 13 | non_neocortex | neocortex | suitable | flash | pgACC is anterior cingulate cortex, treated as neocortex in standard atlases. | pgACC (perigenual anterior cingulate cortex) is a standard cortical/PFC projection ROI; mesocortical ACC is conventionally treated as isocortex, so neocortex. | pgACC is perigenual anterior cingulate cortex; ACC treated as isocortex/neocortex. | |
| dACC | dorsal anterior cingulate cortex | 12 | non_neocortex | neocortex | suitable | flash | dACC is dorsal anterior cingulate cortex, treated as neocortex in standard atlases. | dACC (dorsal anterior cingulate cortex) is a standard cingulate cortical ROI and should be treated as neocortex, not non_neocortex. | dACC is dorsal anterior cingulate cortex; ACC treated as isocortex/neocortex. | |
| posterior cingulate cortex | posterior cingulate cortex | 12 | non_neocortex | neocortex | suitable | flash | Posterior cingulate cortex is cingulate/isocortex; current non_neocortex is wrong. | Posterior cingulate cortex is a standard cortical projection ROI; cingulate usages are preferentially treated as neocortex. | Posterior cingulate cortex is cingulate/isocortex, not non_neocortex. | |
| AIV | agranular insular cortex, ventral part | 11 | non_neocortex | neocortex | suitable | flash | AIV is agranular insular cortex; insula treated as isocortex, so neocortex not non_neocortex. | AIV is agranular insular cortex; insular cortical ROIs are conventionally treated as neocortex in rodent atlases, so current label is incorrect. | AIV/agranular insular cortex ventral is insula; insula treated as isocortex/neocortex. | |
| Cing | cingulate cortex | 11 | non_neocortex | neocortex | suitable | flash | Cingulate cortex is isocortex; should be neocortex, not non_neocortex. | Cingulate cortex is a standard cortical projection ROI; in rodent atlases cingulate/mesocortical areas are conventionally treated as isocortex, so non_neocortex is incorrect. | Cingulate cortex is standard isocortex/neocortex ROI in rodent atlases. | |
| GCL | granule cell layer | 11 | ambiguous | other | unsuitable | layer_only | flash | Granule cell layer is a histological layer, not a concrete region, and may occur in multiple brain structures. | Granule cell layer is a generic cellular layer (cerebellum, dentate gyrus, olfactory bulb) without a uniquely mappable region; unsuitable as an RCS query. | GCL is a lamina name, not a concrete gray-matter region; layer identity alone is insufficient for RCS mapping. |
| contralateral prostriata | prostriata | 10 | non_neocortex | neocortex | suitable | pro | Prostriata is allocortex, thus non-neocortex, suitable ROI. | Prostriata is a visual cortical area in mice, part of isocortex; contralateral descriptor does not change region class. | Prostriata is a visual cortical area in mouse, part of isocortex. | |
| RSg | granular retrosplenial cortex | 10 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is isocortex in rodent atlases; current non_neocortex is misclassified. | RSg = granular retrosplenial cortex; standard cortical projection ROI assigned to isocortex/neocortex in rodent atlases. | Retrosplenial cortex is treated as isocortex/neocortex in rodent atlases; current non_neocortex is wrong. | |
| lIns | left insula | 9 | non_neocortex | neocortex | suitable | flash | Insula is standard isocortical projection ROI; non_neocortex label incorrect. | Left insula is insular cortex; atlas conventions treat insular cortex as neocortical projection ROI despite dysgranular sectors. | Insula is treated as isocortex/neocortex in rodent atlases; 'left insula' is suitable, current non_neocortex is wrong. | |
| rIns | right insula | 9 | ambiguous | neocortex | suitable | flash | Right insula is isocortex; ambiguous label should be neocortex. | Right insula is treated as neocortical projection ROI in rodent atlases; current ambiguous label should be corrected; suitable. | Insula should be neocortex; 'right insula' is a concrete ROI, current ambiguous is wrong. | |
| anterior cingulate | anterior cingulate cortex | 8 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex is ACC, a standard isocortical ROI in atlases. | Anterior cingulate cortex is a standard cortical projection ROI, conventionally treated as cortical in atlas-based mapping. | ACC is treated as neocortex/isocortex in standard atlases; current non_neocortex is wrong. | |
| gRSC | granular retrosplenial cortex | 8 | ambiguous | neocortex | suitable | flash | gRSC is granular retrosplenial cortex, treated as isocortex in rodent atlases. | Granular retrosplenial cortex is a standard retrosplenial cortical ROI; retrosplenial usages are treated as neocortex by atlas convention. | gRSC is retrosplenial cortex, treated as isocortex/neocortex in mouse; not ambiguous. | |
| IT cortex | intratelencephalic | 8 | ambiguous | other | unsuitable | cell_type_or_marker | flash | IT cortex here refers to intratelencephalic projection neurons, a cell class not a brain region. | Fullname 'intratelencephalic' denotes a cortical projection-neuron class, not a mappable region; 'IT cortex' here is not an anatomical ROI. | Intratelencephalic describes a cortical projection neuron class, not an anatomical structure; cell-type/marker-only. |
| layer 5 | layer 5 | 8 | ambiguous | other | unsuitable | layer_only | flash | Layer 5 alone is a cortical layer, not a standalone gray-matter region. | 'layer 5' is a generic cortical layer name with no mappable region; not suitable as an RCS query. | Layer 5 is a cortical layer, not a concrete areal ROI; no areal identity for RCS mapping. |
| sgCC | subgenual anterior cingulate cortex | 8 | non_neocortex | neocortex | suitable | flash | Subgenual anterior cingulate cortex is a standard cingulate projection ROI conventionally treated as neocortex-like; prior non_neocortex label is incorrect. | Subgenual ACC is cingulate cortex; ACC is standard neocortex ROI, so non_neocortex is wrong. | |
| sgC | subgenual cingulate cortex | 7 | non_neocortex | neocortex | suitable | flash | Subgenual cingulate cortex is ACC-related isocortex; current non_neocortex mislabeled. | Subgenual cingulate cortex is a standard cingulate/PFC projection ROI; treat as neocortex despite mesocortical features. | Subgenual cingulate cortex is part of ACC, treated as isocortex in rodent atlases. | |
| ACAd | anterior cingulate cortex, dorsal | 6 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex is isocortex in rodent atlases; current non_neocortex is incorrect. | ACAd is dorsal anterior cingulate cortex, a standard rodent cortical projection ROI; should be neocortex, not non_neocortex. | ACAd is anterior cingulate cortex, a standard isocortex ROI, not non-neocortex. | |
| AID | anterior agranular insular cortex | 6 | non_neocortex | neocortex | suitable | flash | AID is anterior agranular insular cortex; insula treated as isocortex/neocortex in rodent atlases. | AID is insular cortex, a standard isocortex/projection ROI; current non_neocortex is misclassified. | Anterior agranular insular cortex is insular cortex; in rodent atlases this is treated as isocortex/neocortex. | |
| L2/3 neuron | Layer 2/3 neuron | 6 | neocortex | other | unsuitable | cell_type_or_marker | flash | L2/3 neuron is a cortical neuron type defined by layer, not a concrete gray-matter region. | 'L2/3 neuron' is a layer/cell-type label without a mappable cortical region; not a concrete anatomical ROI. | L2/3 neuron is a layer-specific cell type, not a gray-matter ROI |
| posterior cingulate | posterior cingulate cortex | 6 | non_neocortex | neocortex | suitable | flash | Posterior cingulate cortex is cingulate/isocortex; should be neocortex, not non_neocortex. | Posterior cingulate cortex is a standard cortical projection ROI, conventionally treated as isocortex; not non-neocortex. | Posterior cingulate cortex is a cingulate/isocortical projection ROI; should be neocortex. | |
| aRSC | anterior retrosplenial cortex | 5 | non_neocortex | neocortex | suitable | flash | Anterior retrosplenial cortex is treated as isocortex in rodent atlases; should be neocortex. | aRSC is anterior retrosplenial cortex; standard rodent projection ROI, conventionally treated as cortical/neocortex-like in atlas mapping. | Retrosplenial cortex is treated as isocortex in rodent atlases; should be neocortex. | |
| cACC | cingulate anterior cortex | 5 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex (ACC) is isocortex in rodent atlases; should be neocortex. | cACC is anterior cingulate cortex; mesocortical but standard projection ROI; pragmatically neocortex for RCS mapping. | |
| cingulate | cingulate cortex | 5 | ambiguous | neocortex | suitable | flash | Generic cingulate cortex includes anterior and posterior divisions; cannot assign neo vs non-neo. | Cingulate cortex is standard cortical gray matter; despite mesocortical parts, atlases usually treat it as a neocortical projection ROI. | Cingulate cortex is a standard isocortical projection ROI; should be neocortex, not ambiguous. | |
| dRSC | dysgranular retrosplenial cortex | 5 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is standard projection ROI treated as isocortex; current non-neocortex is wrong. | Retrosplenial cortex is a standard limbic cortical ROI conventionally treated as cortical projection endpoint, not allocortex; current non_neocortex is incorrect. | Retrosplenial cortex treated as isocortex in rodent atlases; current non_neocortex is wrong. | |
| L1 INs | Layer 1 interneurons | 5 | neocortex | other | unsuitable | cell_type_or_marker | flash | Layer 1 interneurons are a cell population, not a gray-matter region | Layer 1 interneurons is a layer+cell-type label, not a concrete brain region; unsuitable for RCS mapping. | Layer 1 interneurons are a cell-type population, not a gray-matter region. |
| L6-Ntsr1 | Layer 6 Ntsr1-expressing cells | 5 | neocortex | other | unsuitable | cell_type_or_marker | flash | Ntsr1-expressing cells are marker-defined cell type; layer info does not make it a regional ROI | Layer 6 Ntsr1-expressing cells is a marker-defined cell population, not a mappable gray-matter region. | Ntsr1-expressing cells are a molecular marker population, not an anatomical region. |
| Layer 1 | Layer 1 | 5 | neocortex | ambiguous | unsuitable | layer_only | flash | Layer 1 without cortical region cannot be assigned to neocortex vs allocortex; layer-only ROI | Layer 1 alone is a layer-only label with no specified brain region; not suitable as an RCS test query. | Layer 1 alone is layer-only and ambiguous without a cortex qualifier; unsuitable. |
| layer 2/3 | layer 2/3 | 5 | neocortex | other | unsuitable | layer_only | pro | Layer 2/3 is a cortical layer, not a specific anatomical region. | Layer 2/3 is a cortical lamina, not a specific anatomical region; excluded as layer-only. | Layer 2/3 is a cortical layer, not a specific brain region; region_class ambiguous without context. |
| pdlPUT | 5 | ambiguous | non_neocortex | suitable | flash | Contains PUT, indicates putamen/striatum (basal ganglia); cryptic prefix. | PUT indicates putamen, a striatal/basal-ganglia region; pdl likely posterodorsal-lateral modifier. Thus non-neocortex and mappable despite acronym lacking full expansion. | ||
| RS | retrosplenial | 5 | non_neocortex | neocortex | suitable | flash | Retrosplenial is a standard isocortical ROI in rodents; current non_neocortex is misclassified. | Retrosplenial cortex is cortical gray matter conventionally treated as neocortex in rodent atlases. | Retrosplenial is standard ROI treated as isocortex; current non_neocortex label is wrong. | |
| RSPv | retrosplenial cortex ventral | 5 | non_neocortex | neocortex | suitable | flash | RSPv is a retrosplenial cortex subdivision; treated as isocortex, so current non_neocortex is wrong. | RSPv is retrosplenial cortex ventral, a standard projection ROI treated as isocortex-like in rodent atlases; current non_neocortex is wrong. | RSPv is ventral retrosplenial cortex; treated as isocortex in rodent atlases. | |
| V2a interneurons | V2a interneurons | 5 | neocortex | other | unsuitable | cell_type_or_marker | flash | V2a interneurons are spinal interneuron subtype, not neocortex; cell-type-only. | V2a interneurons are a spinal cord interneuron cell type, not a neocortical ROI; cell-type-only label unsuitable. | V2a is visual cortex, but 'interneurons' denotes cell-type population, not a gray-matter ROI. |
| CFA CSN | 4 | neocortex | other | unsuitable | cell_type_or_marker | flash | CSN=corticospinal neurons; CFA is a location, but the named entity is a neuron population, not a gray-matter region. | CFA is neocortical area; CSN indicates corticospinal neurons, marker-defined population | CFA is neocortical but CSN denotes corticospinal neurons, a cell population, not a pure gray-matter ROI. | |
| Cg1/2 | cingulate cortex | 4 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Cg1/2 are mouse cingulate areas; cingulate/ACC is treated as isocortex, but slash combines two separate regions. | Cg1/2 are anterior cingulate isocortical areas; combined ROI unsuitable. | Cingulate cortex is isocortex in rodent atlases, but Cg1/2 combines Cg1 and Cg2 into a compound ROI. |
| granular retrosplenial cortex | granular retrosplenial cortex | 4 | non_neocortex | neocortex | suitable | flash | Granular retrosplenial cortex is treated as isocortex/neocortex in rodent atlases; non_neocortex is incorrect. | Granular retrosplenial cortex is a standard cortical projection ROI; rat atlas convention treats retrosplenial cortex as neocortex, not allocortex. | Granular retrosplenial cortex is isocortex/retrosplenial area in rodent atlases; non_neocortex is wrong | |
| middle cingulate cortex | middle cingulate cortex | 4 | unresolved | neocortex | suitable | flash | Middle cingulate cortex is cingulate gray matter; treated as isocortical projection ROI for RCS. | Middle cingulate cortex is a standard cingulate cortical ROI; mesocortical cingulate mapped to neocortex by convention. | Middle cingulate cortex is a cingulate isocortical area, not allocortex; resolves prior ambiguity. | |
| parietal DI | parietal dysgranular insula | 4 | non_neocortex | neocortex | suitable | flash | Parietal dysgranular insula is insular cortex; insula is treated as isocortex in rodent atlases. | Dysgranular insula is an insular cortical ROI; rodent atlases conventionally treat insular cortex as isocortex-like projection territory, so reclassify as neocortex. | Dysgranular insula is insular cortex; insula treated as isocortex in atlases. | |
| RSCg | Retrosplenial cortex, granular area | 4 | non_neocortex | neocortex | suitable | flash | Retrosplenial cortex is treated as isocortex; current non-neocortex is wrong. | Retrosplenial granular cortex is a standard cortical projection ROI and is conventionally treated as neocortex in rodent atlases; current non_neocortex is incorrect. | Retrosplenial cortex is standard isocortex; RSCg should be neocortex, not non_neocortex. | |
| TPN-II | TPN-II second-order neurons | 4 | ambiguous | other | unsuitable | cell_type_or_marker | flash | TPN-II refers to second-order neurons, a cell type, not an anatomical ROI. | TPN-II second-order neurons is a cell-type-only label, not a distinct mappable gray-matter region. | TPN-II second-order neurons is a cell-type label, not a gray-matter region. |
| ACC A25 | anterior cingulate cortex A25 | 3 | non_neocortex | neocortex | suitable | flash | ACC is treated as neocortex; current non_neocortex conflicts. | Anterior cingulate cortex area 25 is a cingulate cortical projection ROI; treated as neocortex by convention, so current non_neocortex label is incorrect. | ACC is a standard isocortical projection ROI; A25 is a concrete cingulate gray-matter area, so should be neocortex. | |
| aMIP | 3 | neocortex | ambiguous | unsuitable | acronym_unresolved | flash | aMIP likely anterior medial intraparietal area, a cortical region; acronym not fully resolved but neocortex assignment is plausible. | aMIP has no fullname or species; neither cortical nor subcortical expansion is clear from the acronym alone. | aMIP acronym unresolved; no fullname; possibly cortical intraparietal area but cannot confirm. | |
| ETdist | Slco2a1-expressing layer 5 extratelencephalic neurons | 3 | neocortex | other | unsuitable | cell_type_or_marker | flash | Marker-expressing layer 5 neuron subtype, not a region; current neo not valid. | Layer-5 extratelencephalic neurons are a cell-type/layer population, not a mappable gray-matter region. | Marker-defined layer 5 extratelencephalic neuron population; cell-type-only, not a region. |
| fan cells | fan cells | 3 | non_neocortex | other | unsuitable | cell_type_or_marker | flash | Fan cells are a cell type, not a brain region; no anatomical ROI specified. | Fan cells is a cell type label, not an anatomical gray-matter region. | Fan cells is a cell type, not an anatomical region. |
| HD | 3 | other | ambiguous | unsuitable | acronym_unresolved | flash | HD is a cryptic acronym; cannot determine whether neocortex or non-neocortex. | HD is cryptic acronym without expansion; cannot determine neo vs non-neo from name alone. | Cryptic acronym without full name/species; cannot resolve to a region. | |
| L2-6 | Layers 2-6 | 3 | neocortex | other | unsuitable | layer_only | flash | Layer-only label; no specific cortical area or gray-matter ROI. | L2-6 is a layer range without a specified cortical region; not mappable as a concrete gray-matter ROI. | Layer-only cortical designation; not a concrete gray-matter region for RCS mapping. |
| L6UCThN | Layer 6 upper corticothalamic neurons | 3 | neocortex | other | unsuitable | cell_type_or_marker | flash | Cell-type/layer population, not a distinct gray-matter region. | Layer 6 upper corticothalamic neurons; cell-type population, not a gray-matter ROI. | Layer 6 corticothalamic neuron population; cell-type/layer marker, not a region. |
| layer 5 pyramidal neurons | layer 5 pyramidal neurons | 3 | neocortex | other | unsuitable | cell_type_or_marker | flash | Cell-type/layer label; not a concrete gray-matter region. | No mappable region; 'layer 5 pyramidal neurons' is a layer/cell-type label, not an anatomical ROI. | Layer 5 pyramidal cell population; cell-type designation, not a gray-matter region. |
| layer I | layer I | 3 | neocortex | ambiguous | unsuitable | layer_only | flash | Layer I is a cortical layer, not a distinct region; neocortical vs allocortical affiliation unclear. | Layer I is a cortical layer without a mappable gray-matter region; layer-only names are unsuitable RCS queries. | Layer I is a cortical layer, not a region; insufficient to assign neocortex vs allocortex. |
| left posterior cingulate gyrus | 3 | non_neocortex | neocortex | suitable | flash | Posterior cingulate gyrus is cingulate cortex, treated as neocortex; current non_neocortex is wrong. | Posterior cingulate gyrus is isocortex/neocortex; current non_neocortex is likely wrong. | Posterior cingulate gyrus is cingulate cortex; treated as isocortex/neocortex, so non_neocortex label is wrong. | ||
| NC | 3 | neocortex | ambiguous | unsuitable | acronym_unresolved | flash | NC is unresolved: could mean neocortex or nucleus centralis/caudatus; not decidable. | NC is an unresolved acronym; lacking fullname and species, it could mean neocortex but also other structures, so it cannot be classified reliably. | NC acronym ambiguous: neocortex umbrella or caudate nucleus; cannot resolve from name alone. | |
| pyramidal SPNs | pyramidal-like subplate neurons | 3 | neocortex | other | unsuitable | cell_type_or_marker | flash | Pyramidal-like subplate neurons are a cell population/layer, not a discrete neocortical region. | Subplate is a cortical layer/transient zone; 'pyramidal-like subplate neurons' is a cell type, not a mappable neocortical region. | Pyramidal SPNs are a cell type in subplate, not a concrete gray-matter region. |
| right insula | right insula | 3 | unresolved | neocortex | suitable | flash | Right insula is insular cortex, standard isocortical/neocortical gray-matter ROI. | Insula is a standard cortical gray-matter ROI; per instructions treat insular/mesocortical projection targets as neocortex, so prior unresolved is wrong. | Insula is treated as isocortex/projection cortex; right insula is a concrete ROI. | |
| UL2/3 CPNs | upper layer 2/3 callosal projection neurons | 3 | neocortex | other | unsuitable | cell_type_or_marker | flash | Layer 2/3 callosal projection neurons are a cell population, not an anatomical gray-matter ROI. | Layer-specific callosal projection neuron population; cell-type-only label, not a mappable gray-matter ROI. | Layer-specific callosal projection neurons; cell-type population, not an anatomical gray-matter ROI. |
| 24 | 2 | non_neocortex | neocortex | suitable | pro | Just '24' ambiguous; could be area 24 (neocortex) or another structure; no species, unresolved. | Area 24 = anterior cingulate cortex (isocortex/neocortex). Standard ROI. | Brodmann area 24 is anterior cingulate cortex, a neocortical region; current classification as non-neocortex is incorrect. | ||
| A23V | 2 | non_neocortex | neocortex | suitable | flash | A23V is marmoset area 23 ventral, posterior cingulate/isocortex; not non_neocortex. | Marmoset A23V is area 23 ventral, a posterior cingulate/isocortical area, not non-neocortex; mappable cortical ROI. | A23V = marmoset cingulate area 23v, isocortex; current non_neocortex is incorrect. | ||
| ACAa | 2 | non_neocortex | neocortex | suitable | flash | ACAa likely anterior cingulate area a; ACC is isocortex in rodent atlas, so should be neocortex. | ACAa is an anterior cingulate area subdivision; ACC/cingulate is isocortex in rodent atlases. | ACAa is anterior cingulate area (isocortex); non_neocortex label is incorrect. | ||
| ACC A24a | anterior cingulate cortex A24a | 2 | non_neocortex | neocortex | suitable | flash | ACC/A24a is anterior cingulate cortex, standard isocortex; current non_neocortex is wrong. | ACC A24a is anterior cingulate cortex; standard rodent cingulate treated as isocortex. | Anterior cingulate cortex A24a is isocortex; should not be non_neocortex. | |
| ACC layer II/III | anterior cingulate cortex layer II/III | 2 | non_neocortex | neocortex | unsuitable | layer_only | flash | ACC is isocortex but this is layer II/III only, not a suitable gray-matter ROI. | ACC is isocortical in rodent atlases, but layer II/III is a lamina-specific division, not a whole gray-matter ROI. | ACC is neocortex but layer II/III is layer-only, not a region-level RCS target. |
| ACd | anterior dorsal cingulate | 2 | non_neocortex | neocortex | suitable | flash | Anterior dorsal cingulate is also ACC/isocortex; non_neocortex classification incorrect. | Dorsal anterior cingulate is isocortex in rodent atlas and is a concrete cortical gray-matter ROI. | ACd / anterior dorsal cingulate is isocortical; non_neocortex label is wrong. | |
| agranular cortices | agranular cortices | 2 | ambiguous | other | unsuitable | too_broad | flash | Agranular cortices is a broad cytoarchitectural category spanning multiple areas; cannot map to a single ROI. | Agranular cortices is a broad multi-region category (motor/limbic etc.), not a concrete single anatomical ROI. | Agranular cortices is a broad histological category spanning multiple cortical areas, not a concrete ROI. |
| area 24 | area 24 | 2 | non_neocortex | neocortex | suitable | flash | Brodmann area 24 is anterior cingulate cortex, a standard neocortical/projection ROI; current non_neocortex is wrong. | Area 24 is anterior cingulate cortex (ACC), a standard projection ROI. Atlas/mapping pragmatism treats ACC as neocortex, so non_neocortex is incorrect. | Brodmann area 24 is anterior cingulate cortex; ACC is treated as neocortex. | |
| area 32 | area 32 | 2 | ambiguous | neocortex | suitable | flash | Brodmann area 32 is anterior cingulate/medial prefrontal cortex; neocortical, not ambiguous. | Area 32 is dorsal ACC / medial prefrontal cortex; standard projection ROI. Prefer neocortex per cingulate atlas conventions; ambiguous label can be resolved. | Brodmann area 32 is dorsal anterior cingulate/prefrontal cortex; ACC/PFC is neocortex. | |
| cingulated gyrus | cingulated gyrus | 2 | non_neocortex | neocortex | suitable | flash | Cingulate gyrus is cingulate cortex and should be neocortex, not non-neocortex. | Cingulate gyrus is cingulate cortex/gyrus; per guidelines cingulate usages are treated as neocortex, so prior non_neocortex label should be corrected. | Cingulate gyrus is cingulate cortex; ACC/retrosplenial are treated as isocortex, so non_neocortex is wrong. | |
| cortical areas in the opposite hemisphere | 2 | neocortex | other | unsuitable | too_broad | flash | Phrase refers to multiple cortical areas/opposite hemisphere, an umbrella not a concrete ROI. | Broad phrase 'cortical areas in the opposite hemisphere' does not name a specific cortical region; not mappable as an RCS query. | Cortical areas is an unspecific umbrella phrase; not a concrete ROI despite likely neocortical. | |
| dorsal cortex | dorsal cortex | 2 | neocortex | other | unsuitable | too_broad | flash | 'Dorsal cortex' is a broad umbrella term, not a specific isocortical ROI. | Dorsal cortex is an umbrella term, not a concrete neocortical ROI. | Broad 'dorsal cortex' label; not a specific ROI and ambiguous whether neocortex or allocortex. |
| dorso-medial cortex (lateral wall) | dorso-medial cortex, lateral wall | 2 | neocortex | other | unsuitable | compound_multi_region | flash | 'Dorso-medial cortex plus lateral wall' is a broad positional descriptor, not a defined ROI. | Compound dissection term (dorso-medial cortex + lateral wall), not a standard region. | Compound/split name mixing dorsomedial cortex with lateral wall; not a single unambiguous ROI. |
| dysgranular RSC layer 2/3 | 2 | non_neocortex | neocortex | unsuitable | layer_only | flash | RSC is retrosplenial cortex (treated as neocortex); layer 2/3 makes ROI unsuitable. | dysgranular RSC is a conventional retrosplenial cortex projection ROI; per guidelines this should be treated as neocortex. Layer 2/3 is mappable with the region. | RSC is neocortex per atlas, but layer 2/3 term makes ROI layer-specific; unsuitable. | |
| FLP | 2 | non_neocortex | other | unsuitable | fiber_tract_or_ventricle | flash | Likely fasciculus longitudinalis posterior (fiber tract), not a gray matter ROI. | FLP is fasciculus longitudinalis posterior, a fiber tract, not a gray-matter region. | |
| fusiform SPNs | fusiform subplate neurons | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | Fusiform subplate neurons are a cell type, not an anatomical gray-matter region. | Fusiform subplate neurons are a cell population, not a gray-matter anatomical ROI. | Subplate neurons are a neuronal cell type, not a gray-matter region; unsuitable for ROI mapping. |
| granular insular cortex | agranular insular cortex | 2 | non_neocortex | neocortex | suitable | flash | Insular cortex is treated as isocortex/neocortex in rodent atlases; current non-neocortex is incorrect. | Insula/agranular insular area is isocortex in rodent atlases; current non_neocortex incorrect. | Insular cortex is isocortex in rodent atlases; non-neocortex label is wrong. | |
| hippocampal-projecting fan cells | hippocampal-projecting fan cells | 2 | non_neocortex | other | unsuitable | cell_type_or_marker | flash | Fan cells are a cell type, not a discrete gray-matter region; unsuitable for RCS mapping. | Fan cells are a cell type, not a concrete gray-matter ROI; unsuitable for mapping. | Cell-type-defined projection population, not a gray-matter ROI. |
| IGIB | infragranular layers 5/6 | 2 | neocortex | other | unsuitable | layer_only | flash | Infragranular layers 5/6 are a laminar compartment, not a concrete region; layer-only. | Infragranular layers 5/6 is a layer designation, not a defined anatomical region. | Layer 5/6 only, no specific cortical area; unsuitable for region mapping. |
| ipsilesional cortex | ipsilesional cortex | 2 | neocortex | other | unsuitable | too_broad | flash | Ipsilesional cortex is a generic lesion-side umbrella term, not a specific region. | Ipsilesional cortex is a broad/bare cortex umbrella, not a specific ROI. | Ipsilesional cortex is a broad lesion-side cortex label, not a concrete ROI. |
| L5 PV | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | Layer-specific PV marker cell population, not an anatomical gray-matter ROI | L5 PV indicates layer plus parvalbumin cell marker, not a mappable anatomical region. | L5 PV is a layer-plus-cell-type marker, not a concrete anatomical region. | |
| L5 PV IN | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | Layer 5 PV interneuron marker, not a concrete anatomical region | L5 PV IN is a layer- and cell-type-specific interneuron label, not an anatomical gray-matter ROI. | L5 PV IN denotes an interneuron subtype, not a cortical region. | |
| L5 VIP | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | Layer-specific VIP marker cell population, not an anatomical gray-matter ROI | Layer 5 VIP interneurons: layer+cell-type label with no mappable brain region. | L5 VIP is a layer-plus-cell-type marker, not a concrete anatomical region. | |
| L5 VIP IN | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | Layer 5 VIP interneuron marker, not a concrete anatomical region | Layer + interneuron cell-type label ('IN'); no mappable anatomical region. | L5 VIP IN denotes an interneuron subtype, not a cortical region. | |
| layer 2/3 CPNs | layer 2/3 corticospinal neurons | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | Corticospinal neurons are a cell-type population, not a concrete gray-matter region. | Layer 2/3 corticospinal neurons label a neuronal subtype with layer info, not an anatomical region for RCS mapping. | Layer 2/3 CPNs are a projection-neuron subtype, not a gray-matter ROI; should be other. |
| layer 3 dorsal prostriata | layer 3 of dorsal prostriata | 2 | non_neocortex | neocortex | unsuitable | layer_only | pro | Prostriata is a cortical area; layer 3 indicates isocortex. Current class is non_neocortex, so mismatch. Layer specification makes it unsuitable. | Layer-only mention, not a full region. Dorsal prostriata likely neocortex | Layer 3 of dorsal prostriata, transitional cortex, so layer-only and unsuitable. |
| ld dorsal prostriata | ld (lamina dissecans) of dorsal prostriata | 2 | non_neocortex | neocortex | suitable | unresolved | no_vote_majority; contamination_suspect → neocortex. Lamina dissecans (ld) is a cortical layer, not an ROI; unsuitable for RCS mapping. | |
| left dorsal ACC | dorsal anterior cingulate cortex | 2 | non_neocortex | neocortex | suitable | flash | dorsal ACC is anterior cingulate cortex, treated as isocortex. | Dorsal ACC is a standard cingulate projection ROI; cingulate usages are treated as neocortex, so non_neocortex is incorrect. | ACC is treated as isocortex/neocortex in rodent atlas convention; current non_neocortex label is incorrect. | |
| left paracingulate gyrus | left paracingulate gyrus | 2 | non_neocortex | neocortex | suitable | flash | Paracingulate gyrus is medial frontal neocortex; concrete gyrus ROI. | Paracingulate gyrus is a medial frontal cortical gyrus and should be neocortex; current non_neocortex is incorrect. | Paracingulate gyrus is a medial frontal cortical gyrus, therefore neocortex; current non_neocortex label is wrong. | |
| multiple cortical areas | 2 | ambiguous | other | unsuitable | too_broad | flash | Umbrella phrase; no single anatomical cortical region specified. | 'Multiple cortical areas' is a broad umbrella, not a specific mappable region; unsuitable for RCS mapping. | Non-specific umbrella phrase; does not identify a concrete region. | |
| PaTr | 2 | neocortex | ambiguous | unsuitable | acronym_unresolved | pro | PaTr is an unresolved acronym; cannot confirm neocortex assignment | Acronym 'PaTr' is cryptic, unresolved; cannot assign region class. | Cryptic acronym without context; unable to assign region. | |
| PN1 | premotor neuron Group 1 | 2 | non_neocortex | other | unsuitable | cell_type_or_marker | flash | Premotor neuron Group 1 is a neuron population, not a gray-matter region. | PN1/premotor neuron Group 1 is a neuronal population/cell-type label rather than a concrete anatomical gray-matter ROI. | Premotor neuron group is a cell population, not a gray-matter ROI. |
| PT2 neurons | 2 | neocortex | other | unsuitable | cell_type_or_marker | flash | PT2 neurons refers to a pyramidal tract neuron subtype, not an anatomical region. | PT2 neurons are a layer 5 pyramidal tract cell type, not an anatomical region. | PT2 neurons denote a neuronal subpopulation, not a gray-matter region. | |
| right dorsal ACC | right dorsal anterior cingulate cortex | 2 | non_neocortex | neocortex | suitable | flash | ACC is standard isocortex/projection ROI; current non_neocortex is incorrect. | ACC is cingulate mesocortex conventionally treated as isocortex/projection ROI in rodent atlases; should be neocortex. | ACC is standard rodent isocortex; current non_neocortex is a contamination error. | |
| sACC | subgenual anterior cingulate cortex | 2 | non_neocortex | neocortex | suitable | flash | sACC/ACC is isocortex per rules; non_neocortex labeling is wrong. | sACC is subgenual anterior cingulate cortex; ACC is treated as neocortex. | Subgenual ACC is anterior cingulate cortex, treated as isocortex; current non_neocortex is wrong. | |
| Spy | 2 | other | ambiguous | unsuitable | acronym_unresolved | flash | Spy is cryptic with no fullname; cannot resolve to an anatomical region. | Spy is a cryptic acronym with no fullname or clear conventional expansion; cannot determine a mappable anatomical region or classification. | Spy is a cryptic acronym with no fullname; cannot map to a concrete gray-matter ROI. | |
| ventral anterior cingulate | 2 | non_neocortex | neocortex | suitable | flash | Anterior cingulate cortex is isocortex/neocortex; ventral ACC is cortical gray matter. | Ventral anterior cingulate is a standard cortical/PFC projection ROI treated as neocortex; current non-neocortex label is incorrect. | Anterior cingulate cortex is treated as isocortex in reference atlases; current non_neocortex is mislabel. | ||
| VP2 adPN | 2 | ambiguous | other | unsuitable | cell_type_or_marker | flash | adPN is a Drosophila projection-neuron class, not an anatomical region; VP2 is a glomerulus. | VP2 adPN is an unresolved cryptic acronym with no fullname; cannot determine region class reliably. | adPN indicates antennal-lobe projection neurons, a cell-type label rather than a gray-matter region. | |
| VP3 vPN | 2 | ambiguous | other | unsuitable | cell_type_or_marker | flash | vPN is a Drosophila projection-neuron class, not an anatomical region; VP3 is a glomerulus. | VP3 vPN is an unresolved cryptic acronym with no fullname; cannot determine whether it is neocortex or non_neocortex. | vPN indicates projection-neuron cell types, not an anatomical brain region for RCS mapping. | |
| 3 | 1 | neocortex | ambiguous | unsuitable | ambiguous_name | flash | Bare numeric label '3' lacks fullname; cannot determine cortical vs non-cortical region. | Bare '3' unresolved: could be Brodmann area 3 (neocortex) or CN III; cannot assign confidently. | Bare '3' unresolved; could be layer 3 or area 3, not a reliable region label. | |
| A24a' | medial cingulate cortex A24a' | 1 | non_neocortex | neocortex | suitable | flash | Medial cingulate cortex A24a' is isocortex; current non-neocortex is misclassified. | Medial cingulate area A24a' is a standard cingulate cortical ROI and is conventionally treated as neocortex in atlases. | A24a' medial cingulate is ACC/isocortex; non_neocortex label is wrong. | |
| A24a'/A24b' | middle cingulate cortex | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Middle cingulate cortex is isocortex, but A24a'/A24b' is a compound of two areas. | Middle cingulate cortex subdivision is a cortical projection ROI; cingulate mesocortex is conventionally treated as neocortex in atlases. | A24a'/A24b' cingulate is isocortex but slash compound is not a single ROI. |
| A24a/A24b | anterior cingulate cortex | 1 | non_neocortex | neocortex | unsuitable | compound_multi_region | flash | Compound A24a/A24b is ACC isocortex but combines two subdivisions; not a single RCS ROI. | Anterior cingulate cortex is a standard cortical ROI; should be neocortex, not non_neocortex. | A24a/A24b is cingulate (isocortex), but slash compound is not a single ROI; current non_neocortex wrong. |
| A24b' | medial cingulate cortex A24b' | 1 | non_neocortex | neocortex | suitable | flash | Medial cingulate cortex A24b' is isocortex; current non_neocortex is incorrect. | Medial cingulate A24b' is a cingulate cortical subdivision, conventionally treated as neocortex for projection mapping. | A24b' is medial cingulate/isocortex in rodent atlas; current non_neocortex incorrect. | |
| A29c | A29c | 1 | non_neocortex | neocortex | suitable | flash | Retrosplenial area A29c is isocortex; current non_neocortex is incorrect. | A29c is retrosplenial cortex (BA29 granular c), a standard cortical projection ROI treated as isocortex/mesocortex in atlases; current non_neocortex is inconsistent. | A29c is retrosplenial cortex, treated as isocortex; current non_neocortex wrong. | |
| A30 | A30 | 1 | non_neocortex | neocortex | suitable | flash | Area A30 is retrosplenial cortex isocortex; current non_neocortex is incorrect. | A30 is retrosplenial/cingulate cortex (BA30), a standard cortical projection ROI; atlas convention favors neocortex, so current non_neocortex is wrong. | A30 is retrosplenial/cingulate isocortex; current non_neocortex incorrect. | |
| aIP-derived SPNs | anterior insula progenitor-derived striatal spiny projection neurons | 1 | non_neocortex | other | unsuitable | cell_type_or_marker | flash | Cell population (striatal SPNs), not a brain region; unsuitable despite striatal location. | Anterior insula-derived striatal SPNs are a cell-type population, not a concrete anatomical region. | SPN = spiny projection neuron cell population, not a gray-matter region. |
| ALS projection neurons | ALS projection neurons (aquaductus linearis superior projection neurons) | 1 | non_neocortex | other | unsuitable | cell_type_or_marker | flash | Projection neuron population, not a brain region; unsuitable for RCS mapping. | ALS projection neurons/aquaductus linearis superior projection neurons is a projection-neuron cell type, not an anatomical region. | Named projection-neuron population, not an anatomical ROI; cell-type-only. |
| aMCC/dACC | anterior midcingulate cortex/dorsal anterior cingulate cortex | 1 | ambiguous | neocortex | unsuitable | compound_multi_region | flash | Cingulate cortex is neocortex; compound aMCC/dACC is multi-region and unsuitable. | aMCC and dACC are cingulate cortical ROIs treated as neocortical projection targets; slash compound names two regions, unsuitable as single query. | dACC/cingulate treated as isocortex; aMCC/dACC is a compound ROI. |
| anterior cingulate gyrus | anterior cingulate gyrus | 1 | ambiguous | neocortex | suitable | flash | Anterior cingulate gyrus is a concrete cortical ROI; ACC counts as isocortex. | Anterior cingulate gyrus is a standard ACC/projection ROI; pragmatically treated as neocortex despite mesocortical features. | Anterior cingulate gyrus is ACC, a concrete gray-matter region; treat as neocortex. | |
| anterior insula and cingulate | 1 | unresolved | neocortex | unsuitable | compound_multi_region | flash | Compound of insula and cingulate; both treated as neocortex, but unresolved label should be neocortex. | Name combines anterior insula and cingulate into two distinct cortical ROIs; not a single mappable query despite both being neocortex-like. | Compound of anterior insula and cingulate, both neocortical; unresolved label is wrong. | |
| anterior insular | anterior insular cortex | 1 | non_neocortex | neocortex | suitable | flash | Anterior insular cortex is insula/neocortex; current non_neocortex is incorrect. | Anterior insular cortex is agranular/dysgranular mesocortex but is conventionally treated as a neocortical projection ROI in atlas mapping. | Anterior insular cortex is treated as neocortex; current non_neocortex is incorrect. |
Suitable non_neocortex (top by mentions)
showing 60 / 2368
| structure_name | fullname | species | n_mentions | n_papers | region_class | audit_stage | final_certainty |
|---|---|---|---|---|---|---|---|
| thalamus | thalamus | Human | 582 | 297 | non_neocortex | flash | high |
| BLA | basolateral amygdala | Mouse | 345 | 157 | non_neocortex | flash | high |
| VTA | ventral tegmental area | Mouse | 320 | 144 | non_neocortex | flash | high |
| striatum | striatum | Mouse | 290 | 152 | non_neocortex | flash | high |
| spinal cord | spinal cord | Mouse | 264 | 151 | non_neocortex | flash | high |
| CA1 | CA1 | Mouse | 176 | 90 | non_neocortex | flash | high |
| NAc | nucleus accumbens | Mouse | 172 | 94 | non_neocortex | flash | high |
| PVN | paraventricular nucleus | Mouse | 170 | 78 | non_neocortex | flash | high |
| SC | superior colliculus | Mouse | 170 | 86 | non_neocortex | flash | high |
| IC | inferior colliculus | Mouse | 162 | 65 | non_neocortex | flash | high |
| NTS | nucleus tractus solitarius | Mouse | 157 | 91 | non_neocortex | flash | high |
| LC | locus coeruleus | Mouse | 149 | 72 | non_neocortex | flash | high |
| amygdala | amygdala | Mouse | 145 | 76 | non_neocortex | flash | high |
| BNST | bed nucleus of the stria terminalis | Mouse | 140 | 78 | non_neocortex | flash | high |
| CeA | central amygdala | Mouse | 134 | 72 | non_neocortex | flash | high |
| LH | lateral hypothalamus | Mouse | 134 | 75 | non_neocortex | flash | high |
| MD | mediodorsal thalamus | Mouse | 133 | 65 | non_neocortex | flash | high |
| PAG | periaqueductal gray | Mouse | 126 | 85 | non_neocortex | flash | high |
| PVT | paraventricular thalamus | Mouse | 124 | 67 | non_neocortex | rule | high |
| GPe | globus pallidus externus | Mouse | 123 | 53 | non_neocortex | flash | high |
| SNr | substantia nigra pars reticulata | Mouse | 123 | 51 | non_neocortex | flash | high |
| VP | ventral pallidum | Mouse | 118 | 53 | non_neocortex | flash | high |
| STN | subthalamic nucleus | Mouse | 110 | 52 | non_neocortex | rule | high |
| CA3 | CA3 | Mouse | 108 | 62 | non_neocortex | rule | high |
| hippocampus | hippocampus | Mouse | 104 | 77 | non_neocortex | flash | high |
| cerebellum | cerebellum | Mouse | 102 | 58 | non_neocortex | rule | high |
| DMS | dorsomedial striatum | Mouse | 102 | 51 | non_neocortex | flash | high |
| dLGN | dorsal lateral geniculate nucleus | Mouse | 96 | 50 | non_neocortex | flash | high |
| RE | reuniens nucleus | Mouse | 94 | 34 | non_neocortex | flash | high |
| TRN | thalamic reticular nucleus | Mouse | 94 | 36 | non_neocortex | flash | high |
| VPM | ventral posteromedial thalamus | Mouse | 91 | 49 | non_neocortex | rule | high |
| DG | dentate gyrus | Mouse | 90 | 47 | non_neocortex | flash | high |
| LHb | lateral habenula | Mouse | 90 | 42 | non_neocortex | rule | high |
| DCN | dorsal cochlear nucleus | Mouse | 84 | 29 | non_neocortex | flash | high |
| LS | lateral septum | Mouse | 84 | 37 | non_neocortex | flash | high |
| hypothalamus | hypothalamus | Mouse | 80 | 56 | non_neocortex | flash | high |
| DLS | dorsolateral striatum | Mouse | 77 | 43 | non_neocortex | rule | high |
| PB | parabrachial nucleus | Mouse | 75 | 18 | non_neocortex | flash | high |
| ZI | zona incerta | Mouse | 71 | 37 | non_neocortex | flash | high |
| LHA | lateral hypothalamic area | Mouse | 70 | 34 | non_neocortex | rule | high |
| VLPAG | ventrolateral periaqueductal gray | Mouse | 68 | 29 | non_neocortex | flash | high |
| LGN | lateral geniculate nucleus | Mouse | 67 | 47 | non_neocortex | flash | high |
| SNc | substantia nigra pars compacta | Mouse | 66 | 38 | non_neocortex | rule | high |
| PPN | pedunculopontine nucleus | Mouse | 65 | 16 | non_neocortex | flash | high |
| dorsal striatum | dorsal striatum | Mouse | 63 | 37 | non_neocortex | flash | high |
| putamen | putamen | Human | 63 | 25 | non_neocortex | flash | high |
| POm | posterior medial thalamus | Mouse | 62 | 32 | non_neocortex | flash | high |
| vHPC | ventral hippocampus | Mouse | 62 | 25 | non_neocortex | flash | high |
| CLA | claustrum | Mouse | 61 | 15 | non_neocortex | flash | high |
| PF | parafascicular nucleus | Mouse | 61 | 33 | non_neocortex | flash | high |
| DRN | dorsal raphe nucleus | Mouse | 60 | 31 | non_neocortex | flash | high |
| VL | ventrolateral thalamus | Mouse | 59 | 27 | non_neocortex | rule | high |
| PO | posterior nucleus | Mouse | 57 | 25 | non_neocortex | rule | high |
| PVH | paraventricular hypothalamus | Mouse | 56 | 33 | non_neocortex | rule | high |
| Sub | subiculum | Mouse | 56 | 19 | non_neocortex | flash | high |
| superior colliculus | superior colliculus | Mouse | 56 | 38 | non_neocortex | rule | high |
| VPL | ventral posterolateral nucleus | Mouse | 56 | 38 | non_neocortex | rule | high |
| LPB | lateral parabrachial nucleus | Mouse | 55 | 26 | non_neocortex | flash | high |
| VM | ventromedial thalamus | Mouse | 54 | 33 | non_neocortex | flash | high |
| cervical spinal cord | cervical spinal cord | Mouse | 53 | 29 | non_neocortex | rule | high |
Unsuitable samples
showing 80 / 3575
| structure_name | fullname | n_mentions | region_class | unsuitable_reason | audit_stage | audit_reason |
|---|---|---|---|---|---|---|
| cortex | cortex | 353 | other | too_broad | flash | Bare 'cortex' is an umbrella term, not a concrete gray-matter ROI. | Bare 'cortex' is an umbrella term, not a specific mappable region. | Bare 'cortex' is an umbrella term, not a specific concrete ROI for mapping. |
| brainstem | brainstem | 63 | other | other | rule | rule_keep: rule_prior_other |
| retina | retina | 60 | other | other | rule | rule_keep: rule_prior_other |
| TC | thalamocortical | 58 | other | other | rule | rule_keep: rule_prior_other |
| CST | corticospinal tract | 56 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_prior_other |
| RGC | retinal ganglion cell | 52 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| cerebral cortex | cerebral cortex | 46 | other | too_broad | rule | rule_keep: rule_too_broad,rule_prior_other |
| midbrain | midbrain | 41 | non_neocortex | too_broad | flash | Whole midbrain umbrella; too broad for region-specific mapping. | Midbrain is a broad brain division encompassing many nuclei, not a specific gray-matter ROI suitable for RCS testing. | Midbrain is a broad regional umbrella, not a specific ROI. |
| DRG | dorsal root ganglion | 39 | other | other | rule | rule_keep: rule_prior_other |
| contralateral cortex | contralateral cortex | 37 | other | too_broad | flash | Contralateral cortex is whole-hemisphere cortex, too broad for specific RCS mapping. | Contralateral cortex is too broad and lacks a specific cortical region or parcellation to map reliably. | Contralateral cortex is a side-qualified broad cortical label, not a concrete ROI. |
| LPl | lateral posterior nucleus, pars lateralis | 37 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| SPNs | striatal projection neurons | 36 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| PC | Purkinje cell | 35 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| PT | pyramidal tract neurons | 33 | other | cell_type_or_marker | flash | Pyramidal tract neurons are a cell population, not an anatomical gray-matter ROI. | Pyramidal tract neurons are a neuronal population, not a gray-matter ROI. | PT denotes pyramidal tract neurons, a cell population/fiber-associated label, not a gray-matter ROI. |
| SPN | striatal projection neurons | 33 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| temporal lobe | temporal lobe | 31 | other | other | rule | rule_keep: rule_prior_other |
| motoneurons | motoneurons | 30 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| basal forebrain | basal forebrain | 29 | non_neocortex | compound_multi_region | flash | Basal forebrain is an umbrella for multiple subcortical nuclei, not a single ROI. | Basal forebrain is a subcortical gray-matter region complex, not neocortex; current label is correct. | Basal forebrain is subcortical non-neocortex but broad multi-nucleus region, not a single ROI. |
| CC | corpus callosum | 29 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_prior_other |
| MCC | midcingulate cortex | 29 | ambiguous | ambiguous_name | rule | rule_keep: rule_prior_ambiguous |
| PN | pyramidal neurons | 29 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| L2/3 | Layer 2/3 | 28 | other | layer_only | flash | Layer 2/3 is a cortical layer designation, not a standalone gray-matter region. | Layer 2/3 is a cortical layer designation without a mappable region, not a concrete anatomical ROI. | Layer 2/3 is a cortical layer designation, not a discrete gray-matter ROI for RCS mapping. |
| GC | granule cell | 24 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| brain | brain | 23 | other | too_broad | rule | rule_keep: rule_too_broad,rule_prior_other |
| MOp-ul | primary motor area, upper limb | 23 | neocortex | layer_only | rule | rule_keep: rule_has_layer,rule_compound |
| SSp-bfd | primary somatosensory cortex, barrel field | 23 | neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| VP/SI | ventral pallidum/substantia innominata | 23 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| AACsBLA | 22 | other | other | rule | rule_keep: rule_prior_other | |
| dSPN | direct pathway spiny projection neurons | 22 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| Pro | prosphornic | 22 | ambiguous | ambiguous_name | rule | rule_keep: rule_prior_ambiguous |
| corpus callosum | corpus callosum | 21 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_prior_other |
| DPd | dorsal paragigantocellular nucleus, dorsal part | 21 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| Injection site | 21 | other | other | rule | rule_keep: rule_prior_other | |
| cortical areas | cortical areas | 20 | other | too_broad | flash | Broad umbrella term for all cortical regions, not a specific ROI. | Generic umbrella for all cortical areas; no specific region to map, so unsuitable as RCS query. | Cortical areas is a broad umbrella label, not a single concrete ROI. |
| MOC | medial olivocochlear | 20 | other | cell_type_or_marker | flash | MOC is a neuron population/efferent pathway, not a discrete gray-matter ROI. | Medial olivocochlear is an efferent fiber pathway/neuronal system, not a gray-matter brain region. | Medial olivocochlear refers to a specific neuron population/pathway, not a discrete gray matter ROI. |
| NG | nodose ganglion | 20 | other | other | rule | rule_keep: rule_prior_other |
| cerebral peduncle | cerebral peduncle | 19 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_prior_other |
| bone | bone | 18 | other | other | rule | rule_keep: rule_prior_other |
| corticospinal neurons | corticospinal neurons | 18 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| fpIC | 18 | ambiguous | ambiguous_name | rule | rule_keep: rule_cryptic_acronym,rule_prior_ambiguous | |
| liver | liver | 18 | other | layer_only | rule | rule_keep: rule_has_layer,rule_prior_other |
| LPrm | lateral posterior nucleus, pars rostromedialis | 18 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| PV2 cluster | PV2 cluster | 18 | other | cell_type_or_marker | flash | PV2 cluster is not a standard anatomical region; ambiguous, unsuitable for RCS mapping. | PV2 cluster is a parvalbumin-cell cluster/type label, not a concrete anatomical gray-matter region, so it is unsuitable as an RCS test query. | PV2 cluster is a cell cluster/marker label, not an anatomical gray-matter region. |
| AgRP neurons | Agouti-related peptide neurons | 17 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| AVPPVN | arginine vasopressin-expressing paraventricular nucleus neurons | 17 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| BF Npas1+ | basal forebrain NPAS1-positive neurons | 17 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| corticospinal tract | corticospinal tract | 17 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_prior_other |
| IT neurons | intratelencephalic neurons | 17 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| spinal motor neurons | spinal motor neurons | 17 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| stomach | stomach | 17 | other | other | rule | rule_keep: rule_prior_other |
| 9M | 16 | ambiguous | ambiguous_name | rule | rule_keep: rule_prior_ambiguous | |
| BAT | brown adipose tissue | 16 | other | other | rule | rule_keep: rule_prior_other |
| CB | carotid body | 16 | other | other | rule | rule_keep: rule_prior_other |
| ChCs | chandelier cells | 16 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| BIC | brachium of the inferior colliculus | 15 | other | other | rule | rule_keep: rule_prior_other |
| contralateral hemisphere | contralateral hemisphere | 15 | other | other | rule | rule_keep: rule_prior_other |
| fore- and mid-brain regions | 15 | other | compound_multi_region | rule | rule_keep: rule_compound,rule_prior_other | |
| hCO | human cortical organoid | 15 | other | other | rule | rule_keep: rule_prior_other |
| iSPN | indirect pathway striatal projection neurons | 15 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| Kiss1AVPV/PeN | Kiss1-positive neurons in the AVPV/PeN | 15 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_compound |
| nodose ganglion | nodose ganglion | 15 | other | other | rule | rule_keep: rule_prior_other |
| OPCs | oligodendrocyte precursor cells | 15 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| Unknown source | 15 | other | other | rule | rule_keep: rule_prior_other | |
| ALIC | anterior limb of internal capsule | 14 | other | layer_only | rule | rule_keep: rule_has_layer,rule_fiber,rule_prior_other |
| BLT | brain-like tissue | 14 | other | layer_only | rule | rule_keep: rule_has_layer,rule_prior_other |
| dSPNs | direct-pathway spiny projection neurons | 14 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
| multiple brain regions | multiple brain regions | 14 | other | other | rule | rule_keep: rule_prior_other |
| PoAb | 14 | ambiguous | ambiguous_name | rule | rule_keep: rule_cryptic_acronym,rule_prior_ambiguous | |
| STP | 14 | ambiguous | acronym_unresolved | flash | STP lacks fullname and species; acronym cannot be resolved, so classification is ambiguous. | Cryptic acronym with no expansion or species; identity cannot be resolved to a mappable brain region. | STP acronym cannot be resolved without fullname; cannot determine neo versus non-neo. | |
| AAC | axon-axon initial segment contacts | 13 | other | other | rule | rule_keep: rule_prior_other |
| CT | central thalamus | 13 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| D19 | 13 | ambiguous | acronym_unresolved | flash | Cryptic identifier D19 cannot be resolved to a brain region from name alone. | D19 is a cryptic acronym with no expansion; cannot determine whether it is a brain region. | Cryptic D19 lacks fullname; anatomical identity unresolvable from name. | |
| D2-MSNs | D2-expressing medium spiny neurons | 13 | non_neocortex | cell_type_or_marker | rule | rule_keep: rule_cell_type |
| FSI | parvalbumin-immunopositive fast-spiking interneurons | 13 | other | other | rule | rule_keep: rule_prior_other |
| ICD | inferior colliculus, dorsal nucleus | 13 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| IOM | inferior olivary nucleus, medial subnucleus | 13 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| LL | lateral lemniscus | 13 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_prior_other |
| PnO | pontine reticular nucleus, oral part | 13 | non_neocortex | compound_multi_region | rule | rule_keep: rule_compound |
| PT neurons | corticofugal pyramidal tract neurons | 13 | other | fiber_tract_or_ventricle | rule | rule_keep: rule_fiber,rule_cell_type,rule_prior_other |
| PY | pyramidal neuronal | 13 | other | cell_type_or_marker | rule | rule_keep: rule_cell_type,rule_prior_other |
Summary JSON
{
"generated_at_utc": "2026-08-01T15:21:34.271345+00:00",
"schema": "projection_corpus_curation_v1",
"input": "D:\\OneDrive - miyamoto tatsuya\\workspaces\\ROSETTA\\build_testdata\\rcs_projection_corpus_classified.csv",
"total_records": 6935,
"api_records": 673,
"rule_only_records": 6262,
"api_priority_counts": {
"spotcheck": 116,
"flash_split": 256,
"contamination_suspect": 127,
"weak_neocortex": 174
},
"region_class_before": {
"non_neocortex": 3523,
"other": 1688,
"neocortex": 1458,
"ambiguous": 261,
"unresolved": 5
},
"region_class_after": {
"non_neocortex": 3398,
"other": 1771,
"neocortex": 1526,
"ambiguous": 240
},
"class_corrected_n": 244,
"contamination_non_neo_to_neo": 108,
"flip_neo_to_non_neo": 0,
"suitability_counts": {
"suitable": 3360,
"unsuitable": 3575
},
"unsuitable_reason_counts": {
"too_broad": 67,
"other": 827,
"fiber_tract_or_ventricle": 164,
"cell_type_or_marker": 1331,
"compound_multi_region": 440,
"ambiguous_name": 145,
"layer_only": 514,
"acronym_unresolved": 74,
"not_anatomical": 13
},
"suitable_total": 3360,
"suitable_non_neocortex": 2368,
"suitable_neocortex": 992,
"audit_stage_counts": {
"flash": 637,
"rule": 6262,
"pro": 33,
"unresolved": 3
},
"models": {
"flash": "deepseek-v4-flash",
"pro": "deepseek-v4-pro"
},
"workers": 128,
"batch_size": 6,
"spotcheck_n": 120,
"notes": [
"DeepSeek flash 3-pass + pro on splits completed (resume after top-up).",
"Majority accepted from available flash votes (incl. 2/2 when a pass missing).",
"No-majority rows keep prior region_class (audit_stage=unresolved)."
]
}